simplify requirements

requirements.txt

@@ -1,159 +1,3 @@
-adbc-driver-manager==0.7.0
-adbc-driver-sqlite==0.7.0
-aind-data-access-api==0.15.0
-aind-data-schema==0.33.3
-aind-session==0.2.5
-aind_codeocean_api==0.5.0
-aiobotocore==2.7.0
-aiohttp==3.8.6
-aioitertools==0.11.0
-aiosignal==1.3.1
-allensdk==2.16.2
-annotated-types==0.6.0
-appdirs==1.4.4
-argon2-cffi==23.1.0
-argon2-cffi-bindings==21.2.0
-argschema==3.0.4
-arrow==1.3.0
-asciitree==0.3.3
-asttokens==2.4.0
-async-timeout==4.0.3
-attrs==23.1.0
-backcall==0.2.0
-bcrypt==4.2.0
-beautifulsoup4==4.12.2
-bidsschematools==0.7.2
-bleach==6.1.0
-blosc2==2.7.0
-boto3==1.28.17
-botocore==1.31.64
-Bottleneck==1.3.7
-bqplot==0.12.42
-cachetools==5.3.3
-ccfwidget==0.5.3
-certifi==2023.7.22
-cffi==1.16.0
-charset-normalizer==3.3.0
-ci-info==0.3.0
-click==8.1.7
-click-didyoumean==0.3.0
-cloudpickle==3.0.0
-codeocean==0.1.5
-colorama==0.4.6
-colorcet==3.0.1
-comm==0.1.4
-connectorx==0.3.2
-contourpy==1.1.1
-crc32c==2.3.post0
-cryptography==41.0.4
-cycler==0.12.1
-dandi==0.62.2
-dandischema==0.10.1
-dask==2023.11.0
-dataclasses==0.6
-dataclasses-json==0.6.7
-debugpy==1.8.0
-decorator==5.1.1
-defusedxml==0.7.1
-deltalake==0.10.1
-dictdiffer==0.9.0
-distro==1.9.0
-dnspython==2.4.2
--e git+https://github.com/AllenInstitute/dynamic_routing_analysis@84191305f91a4b21e2804952e39e12b97849aa3b#egg=dynamic_routing_analysis
-DynamicRoutingTask==0.1.102
-email-validator==2.0.0.post2
-entrypoints==0.4
-et-xmlfile==1.1.0
-etelemetry==0.3.1
-executing==2.0.0
-fasteners==0.19
-fastjsonschema==2.18.1
-fonttools==4.43.1
-fqdn==1.5.1
-frozenlist==1.4.0
-fscacher==0.4.0
-fsspec==2023.12.2
-future==1.0.0
-gast==0.4.0
-gevent==23.9.1
-Glymur==0.13.3
-greenlet==3.0.0
-h5py==3.10.0
-hdmf==3.14.4
-hdmf_zarr==0.8.0
-hdmf_zarr_bjh==0.8.1.post1
-humanize==4.8.0
-idna==3.4
-imageio==2.31.5
-importlib-metadata==4.13.0
-inflection==0.5.1
-interleave==0.2.1
-ipydatagrid==1.2.0
-ipydatawidgets==4.3.2
-ipyfilechooser==0.6.0
-ipykernel==6.25.2
-ipympl==0.9.3
-ipython==8.16.1
-ipython-genutils==0.2.0
-ipytree==0.2.2
-ipyvolume==0.6.3
-ipyvue==1.10.1
-ipyvuetify==1.8.10
-ipywebrtc==0.6.0
-ipywidgets==8.0.0
-isodate==0.6.1
-isoduration==20.11.0
-itk-core==5.3.0
-itk-filtering==5.3.0
-itk-meshtopolydata==0.10.0
-itk-numerics==5.3.0
-itkwidgets==0.32.4
-jaraco.classes==3.3.0
-jedi==0.19.1
-Jinja2==3.1.2
-jmespath==1.0.1
-joblib==1.3.2
-jsonpointer==2.4
-jsonschema==4.19.1
-jsonschema-specifications==2023.7.1
-jupyter_client==8.4.0
-jupyter_core==5.4.0
-jupyterlab-pygments==0.2.2
-jupyterlab_widgets==3.0.11
-keyring==24.2.0
-keyrings.alt==5.0.0
-kiwisolver==1.4.5
-lazy_loader==0.3
-llvmlite==0.42.0
-locket==1.0.0
-loky==3.4.1
-lxml==5.2.2
-markdown-it-py==3.0.0
-MarkupSafe==2.1.3
-marshmallow==3.21.3
-matplotlib==3.9.0
-matplotlib-inline==0.1.6
-mdurl==0.1.2
-mistune==3.0.2
-more-itertools==10.1.0
-msgpack==1.0.7
-multidict==6.0.4
-mypy-extensions==1.0.0
-natsort==8.4.0
-nbclient==0.8.0
-nbconvert==7.9.2
-nbformat==5.9.2
-ndindex==1.7
-ndx-events==0.2.0
-ndx-grayscalevolume==0.0.2
-ndx-icephys-meta==0.1.0
-ndx-pose==0.1.1
-ndx-spectrum==0.2.2
-neo==0.12.0
-nest-asyncio==1.5.8
-networkx==3.1
-nlopt==2.6.1
-notebook==6.4.13
 npc-ephys==0.1.25
 npc-io==0.1.30
 npc-mvr==0.1.7
@@ -164,128 +8,10 @@ npc-utils==0.1.3
 npc_lims==0.1.176
 npc_session==0.1.39
 npc_sessions==0.0.244
-nptyping==2.5.0
-numba==0.59.0
-numcodecs==0.11.0
-numexpr==2.8.7
 numpy==1.26.3
-nwbinspector==0.4.30
-nwbwidgets==0.11.3
-odfpy==1.4.1
-opencv-python-headless==4.9.0.80
-openpyxl==3.1.2
-packaging==23.2
-pandas==2.2.0
-pandocfilters==1.5.0
-param==2.0.1
-paramiko==3.5.0
-parso==0.8.3
-partd==1.4.1
-patsy==0.5.6
-pickleshare==0.7.5
-Pillow==10.1.0
-platformdirs==3.11.0
-plotly==5.13.1
-polars==1.7.1
-probeinterface==0.2.17
-prometheus-client==0.18.0
-prompt-toolkit==3.0.39
-psutil==5.9.6
-psycopg2-binary==2.9.9
-pure-eval==0.2.2
-py-cpuinfo==9.0.0
-py2vega==0.6.1
-pyarrow==16.1.0
-pycparser==2.21
-pycryptodomex==3.19.0
-pyct==0.5.0
-pydantic==2.8.0
-pydantic-settings==2.3.4
-pydantic_core==2.20.0
-pydbhub-bjh==0.0.9
-Pygments==2.16.1
-pymongo==4.3.3
-PyNaCl==1.5.0
-pynrrd==1.0.0
-pynwb==2.8.2
-pyOpenSSL==23.2.0
-pyout==0.7.3
-pyparsing==3.1.1
-python-dateutil==2.8.2
-python-dotenv==1.0.1
-pythreejs==2.4.2
-pytz==2023.3.post1
-pywin32==306
-pywin32-ctypes==0.2.2
-pywinpty==2.0.12
-pyxlsb==1.0.10
-PyYAML==6.0.1
-pyzmq==25.1.1
-quantities==0.14.1
-redis==5.0.1
-referencing==0.30.2
-requests==2.31.0
-requests-toolbelt==1.0.0
-rfc3339-validator==0.1.4
-rfc3987==1.3.8
-rich==13.6.0
-rpds-py==0.10.6
-ruamel.yaml==0.17.35
-ruamel.yaml.clib==0.2.8
-s3fs==2023.12.2
-s3transfer==0.6.2
 scikit-build==0.18.0
 scikit-image==0.22.0
 scikit-learn==1.4.0
 scipy==1.14.0
-seaborn==0.13.2
-semantic-version==2.10.0
-semver==3.0.2
-Send2Trash==1.8.2
-SimpleITK==2.3.0
-simplejson==3.19.2
-six==1.16.0
-soupsieve==2.5
-spikeinterface==0.98.2
-SQLAlchemy==2.0.22
-sshtunnel==0.4.0
-stack-data==0.6.3
-statsmodels==0.14.1
-tables==3.9.2
-tenacity==8.2.3
-terminado==0.18.0
-threadpoolctl==3.2.0
-tifffile==2023.9.26
-tinycss2==1.2.1
-toolz==0.12.0
-tornado==6.3.3
-tqdm==4.66.1
-traitlets==5.6.0
-traittypes==0.2.1
-trimesh==4.0.0
-types-python-dateutil==2.8.19.14
-types-PyYAML==6.0.12.12
-types-requests==2.31.0.20240125
-typing-inspect==0.9.0
-typing_extensions==4.9.0
-tzdata==2023.3
-universal-pathlib==0.1.4
-uri-template==1.3.0
-urllib3==2.0.7
-wavpack-numcodecs==0.1.5
-wcwidth==0.2.8
-webcolors==1.13
-webencodings==0.5.1
-widgetsnbextension==4.0.11
-wrapt==1.15.0
 xarray==2023.9.0
-xlrd==2.0.1
-xlsx2csv==0.8.1
-XlsxWriter==3.1.8
-yarl==1.9.2
-zarr==2.17.2
-zarr-checksum==0.4.0
-zipp==3.17.0
-zope.event==5.0
-zope.interface==6.1
-zstandard==0.22.0
+