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BU-ISCIII

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  1. plasmidID plasmidID Public

    PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.

    Shell 38 8

  2. iskylims iskylims Public

    is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

    Python 72 35

  3. buisciii-tools buisciii-tools Public

    set of helper tools for bu-isciii management of its core services portfolio.

    Python 1 13

  4. viralrecon viralrecon Public

    Forked from nf-core/viralrecon

    Assembly and intrahost/low-frequency variant calling for viral samples

    Nextflow 5

  5. BU-ISCIII BU-ISCIII Public

    Our Wiki and main public documentation repository.

    3 9

Repositories

Showing 10 of 68 repositories
  • relecov-tools Public

    set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload to public databases, as well as analysis runs and database storage.

    BU-ISCIII/relecov-tools’s past year of commit activity
    Python 5 GPL-3.0 23 26 2 Updated Dec 23, 2024
  • buisciii-tools Public

    set of helper tools for bu-isciii management of its core services portfolio.

    BU-ISCIII/buisciii-tools’s past year of commit activity
    Python 1 GPL-3.0 13 21 0 Updated Dec 23, 2024
  • relecov-platform Public
    BU-ISCIII/relecov-platform’s past year of commit activity
    Python 1 GPL-3.0 6 13 1 Updated Dec 20, 2024
  • BU-ISCIII Public

    Our Wiki and main public documentation repository.

    BU-ISCIII/BU-ISCIII’s past year of commit activity
    3 9 8 0 Updated Dec 20, 2024
  • virology_training Public

    This repo contains all the resources needed to follow the virology training to analyze viral sequencing data.

    BU-ISCIII/virology_training’s past year of commit activity
    HTML 4 3 0 0 Updated Dec 16, 2024
  • viralrecon Public Forked from nf-core/viralrecon

    Assembly and intrahost/low-frequency variant calling for viral samples

    BU-ISCIII/viralrecon’s past year of commit activity
    Nextflow 0 MIT 114 0 0 Updated Nov 29, 2024
  • infectious-diseases-toolkit Public Forked from elixir-europe/infectious-diseases-toolkit

    Infectious diseases toolkit

    BU-ISCIII/infectious-diseases-toolkit’s past year of commit activity
    Python 0 40 0 0 Updated Nov 26, 2024
  • iskylims Public

    is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

    BU-ISCIII/iskylims’s past year of commit activity
    Python 72 GPL-3.0 35 35 3 Updated Nov 15, 2024
  • galaxy_virologist_training Public

    Galaxy training for virology profiles

    BU-ISCIII/galaxy_virologist_training’s past year of commit activity
    HTML 0 3 2 0 Updated Nov 15, 2024
  • bacass Public Forked from nf-core/bacass

    Simple bacterial assembly and annotation pipeline

    BU-ISCIII/bacass’s past year of commit activity
    Nextflow 0 MIT 43 0 0 Updated Nov 6, 2024
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