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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 14

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

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Repositories

Showing 10 of 386 repositories
  • CDCgov/RecordLinker’s past year of commit activity
    Python 1 Apache-2.0 0 15 1 Updated Oct 5, 2024
  • phdi Public
    CDCgov/phdi’s past year of commit activity
    HTML 34 CC0-1.0 14 215 14 Updated Oct 5, 2024
  • CDCgov/cfa_azure’s past year of commit activity
    Python 9 Apache-2.0 2 16 2 Updated Oct 5, 2024
  • CDCgov/data-exchange-processing-status’s past year of commit activity
    Kotlin 1 Apache-2.0 0 1 4 Updated Oct 5, 2024
  • phoenix Public

    🔥🐦🔥PHoeNIx: A short-read pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 55 Apache-2.0 19 9 2 Updated Oct 5, 2024
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 6 2 0 0 Updated Oct 4, 2024
  • ixa Public
    CDCgov/ixa’s past year of commit activity
    Rust 5 Apache-2.0 0 9 8 Updated Oct 4, 2024
  • tostadas Public

    🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission

    CDCgov/tostadas’s past year of commit activity
    Python 24 Apache-2.0 7 14 0 Updated Oct 4, 2024
  • pyrenew-hew Public

    Models and infrastructure for forecasting COVID-19 hospitalizations using wastewater data with PyRenew

    CDCgov/pyrenew-hew’s past year of commit activity
    R 3 Apache-2.0 0 9 2 Updated Oct 4, 2024
  • CDCgov/dibbs-product-demos’s past year of commit activity
    HTML 1 Apache-2.0 0 1 7 Updated Oct 4, 2024