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Error reading from the FASTA/Q stream. Minimum return code for left and right read was (-2). #941

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Hanjiangna opened this issue Jun 27, 2024 · 0 comments

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@Hanjiangna
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Dear developer
Error reading from the FASTA/Q stream. Minimum return code for left and right read was (-2).
code salmon quant -i $IndexDir -p 15 -l A -1 ${CleanDataDir}/${treat}${CleanReads1Suffix} -2 ${CleanDataDir}/${treat}${CleanReads2Suffix} -o ${outDir}/${treat}

How should I go about solving this error or investigating its cause?

Best wishes!

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