NEMO (Nucleus for European Modelling of the Ocean) is a state-of-the-art modelling framework for research activities and forecasting services in ocean and climate sciences.
FABM (Framework for Aquatic Biogeochemical Models) is a programming framework for biogeochemical models of marine and freshwater systems.
This repository adds the coupling within the NEMO-TOP module to run biogeochemical models through FABM for NEMO4.0. The starting NEMO branch is version 4.0.4, revision 14301. Details of the changes made, along with an example compilation can be seen on the repository wiki.
NEMO relies on XIOS to provide input/output. A brief overview of the format of XIOS xml files is available here.
---
This repository includes arch files needed for compiling on UEA HPC (Ada). Instructions for how to compile on UEA HPC can be found here
NB. While this repository contains modifications for using FABM, FABM itself must be compiled separately.