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feat: deduplicate with UMIs #246

feat: deduplicate with UMIs

feat: deduplicate with UMIs #246

Triggered via pull request July 3, 2024 16:43
Status Failure
Total duration 42s
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Matrix: Build and publish
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33 errors and 1 warning
Build and publish (multiqc)
buildx failed with: ERROR: failed to solve: dockerfile parse error on line 3: unknown instruction: <<<<<<<
Build and publish (msisensorpro)
The job was canceled because "multiqc" failed.
Build and publish (msisensorpro)
The operation was canceled.
Build and publish (purecn)
The job was canceled because "multiqc" failed.
Build and publish (purecn)
The operation was canceled.
Build and publish (vcf2cytosure)
The job was canceled because "multiqc" failed.
Build and publish (vcf2cytosure)
The operation was canceled.
Build and publish (varcall_py3)
The job was canceled because "multiqc" failed.
Build and publish (varcall_py3)
The operation was canceled.
Build and publish (align_qc)
The job was canceled because "multiqc" failed.
Build and publish (align_qc)
The operation was canceled.
Build and publish (somalier)
The job was canceled because "multiqc" failed.
Build and publish (somalier)
The operation was canceled.
Build and publish (htslib)
The job was canceled because "multiqc" failed.
Build and publish (htslib)
The operation was canceled.
Build and publish (delly)
The job was canceled because "multiqc" failed.
Build and publish (delly)
The operation was canceled.
Build and publish (coverage_qc)
The job was canceled because "multiqc" failed.
Build and publish (coverage_qc)
The operation was canceled.
Build and publish (gatk)
The job was canceled because "multiqc" failed.
Build and publish (gatk)
The operation was canceled.
Build and publish (cnvpytor)
The job was canceled because "multiqc" failed.
Build and publish (cnvpytor)
The operation was canceled.
Build and publish (cadd)
The job was canceled because "multiqc" failed.
Build and publish (annotate)
The job was canceled because "multiqc" failed.
Build and publish (cadd)
The operation was canceled.
Build and publish (annotate)
The operation was canceled.
Build and publish (ascatNgs)
The job was canceled because "multiqc" failed.
Build and publish (ascatNgs)
The operation was canceled.
Build and publish (cnvkit)
The job was canceled because "multiqc" failed.
Build and publish (cnvkit)
The operation was canceled.
Build and publish (varcall_py27)
The job was canceled because "multiqc" failed.
Build and publish (varcall_py27)
The operation was canceled.
Build and publish (multiqc)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, docker/setup-qemu-action@v2, docker/setup-buildx-action@v2, docker/login-action@v2, docker/build-push-action@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/