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feat: deduplicate with UMIs #252

feat: deduplicate with UMIs

feat: deduplicate with UMIs #252

Triggered via pull request July 5, 2024 09:13
Status Failure
Total duration 2m 3s
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Matrix: Build and publish
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33 errors and 1 warning
Build and publish (varcall_py3)
The process '/usr/bin/docker' failed with exit code 1
Build and publish (msisensorpro)
The job was canceled because "varcall_py3" failed.
Build and publish (msisensorpro)
The operation was canceled.
Build and publish (somalier)
The job was canceled because "varcall_py3" failed.
Build and publish (somalier)
The operation was canceled.
Build and publish (delly)
The job was canceled because "varcall_py3" failed.
Build and publish (delly)
The operation was canceled.
Build and publish (ascatNgs)
The job was canceled because "varcall_py3" failed.
Build and publish (ascatNgs)
The operation was canceled.
Build and publish (gatk)
The job was canceled because "varcall_py3" failed.
Build and publish (gatk)
The operation was canceled.
Build and publish (cadd)
The job was canceled because "varcall_py3" failed.
Build and publish (cadd)
The operation was canceled.
Build and publish (coverage_qc)
The job was canceled because "varcall_py3" failed.
Build and publish (coverage_qc)
The operation was canceled.
Build and publish (annotate)
The job was canceled because "varcall_py3" failed.
Build and publish (annotate)
The operation was canceled.
Build and publish (varcall_py27)
The job was canceled because "varcall_py3" failed.
Build and publish (varcall_py27)
The operation was canceled.
Build and publish (align_qc)
The job was canceled because "varcall_py3" failed.
Build and publish (align_qc)
The operation was canceled.
Build and publish (cnvpytor)
The job was canceled because "varcall_py3" failed.
Build and publish (cnvpytor)
The operation was canceled.
Build and publish (vcf2cytosure)
The job was canceled because "varcall_py3" failed.
Build and publish (vcf2cytosure)
The operation was canceled.
Build and publish (cnvkit)
The job was canceled because "varcall_py3" failed.
Build and publish (cnvkit)
The operation was canceled.
Build and publish (multiqc)
The job was canceled because "varcall_py3" failed.
Build and publish (multiqc)
The operation was canceled.
Build and publish (purecn)
The job was canceled because "varcall_py3" failed.
Build and publish (purecn)
The operation was canceled.
Build and publish (htslib)
The job was canceled because "varcall_py3" failed.
Build and publish (htslib)
The operation was canceled.
Build and publish (varcall_py3)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3, docker/setup-qemu-action@v2, docker/setup-buildx-action@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/