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Update multiomics_submission.md
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Ales-ibt authored Mar 4, 2024
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Expand Up @@ -42,4 +42,4 @@ Multi-omics data generated from both animal host and microbiome, along with phys

The ENA and BioSamples databases are connected by the `SAME` (or interchangeably `SAMN`/`SAMD` depending on the original deposition resource) sample accession IDs, as BioSamples accessions can be used as primary or secondary identifiers in ENA. Microbiome annotation data in MGnify inherits ENA metadata, connecting the BioSamples ID automatically under the ‘sample_biosample’ field in the metadata table. For the rest of the databases (MetaboLights in this particular example), `SAME` IDs per sample and animal were used to populate the metadata tables under the ‘Comment[BioSamples accession]’ and ‘Factor Value[Animal ID]’ fields respectively during the data submission.

[Figure 3. An extract of the samples table displayed in MetaboLights for Holofood chicken data (accession [MTBLS6988](https://www.ebi.ac.uk/metabolights/editor/MTBLS6988/descriptors))](images/multiomics/metabolights_example.png){#metabolights_example .tall-figure fig-align="left"}
[Figure 3. An extract of the samples table displayed in MetaboLights for Holofood chicken data (accession [MTBLS6988](https://www.ebi.ac.uk/metabolights/editor/MTBLS6988/descriptors))](images/multiomics/metabolights_example.png){#metabolights_example}

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