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@SandyRogers SandyRogers released this 28 Jul 14:20
· 35 commits to main since this release
v1.2.0
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Learn about vigilant mode.

What's Changed

  • Biohackaton2022 genomes notebook by @vestalisvirginis in #11
  • Switch to jupyter/minimal-notebook:lab-3.6.3 as base image, since the Conda environments for Py and R are now split, we do not need any science packages installed in the base conda env – just Jupyter.
  • Replace query-parameters forwarding extension (deep links support) with newer JupyterLab template.
  • A bit more conda environment rationalising.

TODO but not done this time

  • Consider use of conda-pack/unpack and multi-stage docker build to reduce size of docker image. Current size seems to be too large for GitHub Actions.
  • Move example-data to a remote source (e.g. somewhere in this git repo), or at least gzip it.
  • Upgrade to JupyterLab 4. Currently, there is a problem with the default URL being the notebook tree instead of lab.

New Contributors

Full Changelog: v1.1.0...v1.2.0

Contributors

vestalisvirginis
Assets 2
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