links to get the scripts associated with my different publications (in particular for the two in forgemia)
Assessing by Modeling the Consequences of Increased Recombination in Recurrent Selection of Oryza sativa and Brassica rapa
Elise Tourrette, Rex Bernardo, Matthieu Falque, Olivier C Martin
G3 Genes|Genomes|Genetics, Volume 9, Issue 12, 1 December 2019, Pages 4169–4181, https://doi.org/10.1534/g3.119.400545
see https://sourcesup.renater.fr/frs/download.php/latestfile/2217/CAREB_R.tar.gz for the simulation scripts
Enhancing backcross programs through increased recombination.
Tourrette, E., Falque, M. & Martin, O.C.
Genet Sel Evol 53, 25 (2021). https://doi.org/10.1186/s12711-021-00619-0
see https://sourcesup.renater.fr/frs/download.php/latestfile/2217/CAREB_12.tar.gz for the simulation scripts
Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations
Harry A. Thorpe, Elise Tourrette, Koji Yahara, Filipa M. Vale, Siqi Liu, Mónica Oleastro, Teresa Alarcon, TsachiTsadok Perets, Saeid Latifi-Navid, Yoshio Yamaoka, Beatriz Martinez-Gonzalez, Ioannis Karayiannis, Timokratis Karamitros, Dionyssios N. Sgouras, Wael Elamin, Ben Pascoe, Samuel K. Sheppard, Jukka Ronkainen, Pertti Aro, Lars Engstrand, Lars Agreus, Sebastian Suerbaum, Kaisa Thorell, Daniel Falush
Nature Communications 13, 6842 (2022). https://doi.org/10.1038/s41467-022-34475-3
public repository: Hpylori/HpEurope -> https://github.com/EliseTourrette/Hpylori/tree/main/HpEurope
An ancient ecotype of Helicobacter pylori found in Indigenous populations and animal adapted lineages Elise Tourrette, Roberto C. Torres, Sarah L. Svensson, Takashi Matsumoto, Muhammad Miftahussurur, Kartika Afrida Fauzia, Ricky Indra Alfaray, Ratha-Korn Vilaichone, Vo Phuoc Tuan, HelicobacterGenomicsConsortium, Abbas Yadegar, Lisa Olsson, Zhemin Zhou, Yoshio Yamaoka, Kaisa Thorell, Daniel Falush bioRxiv 2023.04.28.538659; doi: https://doi.org/10.1101/2023.04.28.538659 scripts to be put in the public repository Hpylori/HpEcotype