Change checkM extension

GenomicsAotearoa · Sep 4, 2024 · 8ee5636 · 8ee5636
1 parent 7179834
commit 8ee5636
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/docs/day2/ex9_refining_bins.md b/docs/day2/ex9_refining_bins.md
@@ -440,7 +440,7 @@ Moment of truth! How did your decisions impact the genome metrics of the refined
     # Run CheckM
     checkm lineage_wf -t $SLURM_CPUS_PER_TASK \
                       --pplacer_threads $SLURM_CPUS_PER_TASK \
-                      -x fa --tab_table -f refined_bins.checkm.txt \
+                      -x fna --tab_table -f refined_bins.checkm.txt \
                       refined_bins/ refined_bins.checkm_out/
     ```