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Constrained HYdroxy Methylation Estimation method

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CHYME

CHYME.stan: The stan codes for CHYME model.

example_CHYME.r: an example of emplementing CHYME on a simulated dataset.

OxBS.r: R functions for OxyBS method (houseman 2016).

oxBS_HTest.r: R functions to conduct Hypothesis test for OxyBS methods.

example_OxyBS.r: an example of emplementing OxyBS method on a simulated dataset.

LMC.r: R functions for LMC model.

LMERC.r: R functions for LMERC model.

LMO.r: R functions for LMO model.

LMERO.r: R functions for LMERO model.

Email: lai.jiang@affiliate.mcgill.ca

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Constrained HYdroxy Methylation Estimation method

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  • R 92.0%
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