Merge pull request #5 from turgeonmaxime/master

fix example in agreement doc
GreenwoodLab · Feb 4, 2016 · acc6615 · acc6615
2 parents 394bcc6 + fac5f3b
commit acc6615
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diff --git a/README.md b/README.md
@@ -1,5 +1,5 @@
 # funtooNorm 
-
+[![Build Status](https://travis-ci.org/GreenwoodLab/funtooNorm.svg?branch=master)](https://travis-ci.org/GreenwoodLab/funtooNorm)
 
 The R package ```funtooNorm```  provides a function for normalization of Illumina Infinium Human Methylation 450
 BeadChip (Illumina 450K) data when there are samples from multiple tissues or cell types.

diff --git a/man/agreement.Rd b/man/agreement.Rd
@@ -41,7 +41,7 @@
      funtoonormout <- funtoonorm(sigA=sigAsample, sigB=sigBsample, Annot=Annot,
                       controlred=matred, controlgrn=matgrn,
                       cp.types=NULL, cell_type = cell_type,
-                      logged.data=FALSE, save.quant=TRUE, ncmp=ncmp, apply.fits=TRUE,
+                      logged2.data=FALSE, save.quant=TRUE, ncmp=ncmp, apply.fits=TRUE,
                       validate=FALSE)
 
      #To calculate measures of agreement before and  after normalization