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feat(vector): add sub function #21825

feat(vector): add sub function

feat(vector): add sub function #21825

Workflow file for this run

on:
merge_group:
pull_request:
types: [ opened, synchronize, reopened, ready_for_review ]
paths-ignore:
- 'docs/**'
- 'config/**'
- '**.md'
- '.dockerignore'
- 'docker/**'
- '.gitignore'
- 'grafana/**'
push:
branches:
- main
paths-ignore:
- 'docs/**'
- 'config/**'
- '**.md'
- '.dockerignore'
- 'docker/**'
- '.gitignore'
- 'grafana/**'
workflow_dispatch:
name: CI
concurrency:
group: ${{ github.workflow }}-${{ github.head_ref || github.run_id }}
cancel-in-progress: true
jobs:
check-typos-and-docs:
name: Check typos and docs
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v4
- uses: crate-ci/typos@master
- name: Check the config docs
run: |
make config-docs && \
git diff --name-only --exit-code ./config/config.md \
|| (echo "'config/config.md' is not up-to-date, please run 'make config-docs'." && exit 1)
license-header-check:
runs-on: ubuntu-20.04
name: Check License Header
steps:
- uses: actions/checkout@v4
- uses: korandoru/hawkeye@v5
check:
name: Check
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ windows-2022, ubuntu-20.04 ]
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
# Shares with `Clippy` job
shared-key: "check-lint"
- name: Run cargo check
run: cargo check --locked --workspace --all-targets
toml:
name: Toml Check
runs-on: ubuntu-20.04
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- uses: actions-rust-lang/setup-rust-toolchain@v1
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "check-toml"
- name: Install taplo
run: cargo +stable install taplo-cli --version ^0.9 --locked
- name: Run taplo
run: taplo format --check
build:
name: Build GreptimeDB binaries
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-20.04 ]
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
- uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "build-binaries"
- name: Install cargo-gc-bin
shell: bash
run: cargo install cargo-gc-bin
- name: Build greptime binaries
shell: bash
# `cargo gc` will invoke `cargo build` with specified args
run: cargo gc -- --bin greptime --bin sqlness-runner
- name: Pack greptime binaries
shell: bash
run: |
mkdir bins && \
mv ./target/debug/greptime bins && \
mv ./target/debug/sqlness-runner bins
- name: Print greptime binaries info
run: ls -lh bins
- name: Upload artifacts
uses: ./.github/actions/upload-artifacts
with:
artifacts-dir: bins
version: current
fuzztest:
name: Fuzz Test
needs: build
runs-on: ubuntu-latest
timeout-minutes: 60
strategy:
fail-fast: false
matrix:
target: [ "fuzz_create_table", "fuzz_alter_table", "fuzz_create_database", "fuzz_create_logical_table", "fuzz_alter_logical_table", "fuzz_insert", "fuzz_insert_logical_table" ]
steps:
- name: Remove unused software
run: |
echo "Disk space before:"
df -h
[[ -d /usr/share/dotnet ]] && sudo rm -rf /usr/share/dotnet
[[ -d /usr/local/lib/android ]] && sudo rm -rf /usr/local/lib/android
[[ -d /opt/ghc ]] && sudo rm -rf /opt/ghc
[[ -d /opt/hostedtoolcache/CodeQL ]] && sudo rm -rf /opt/hostedtoolcache/CodeQL
sudo docker image prune --all --force
sudo docker builder prune -a
echo "Disk space after:"
df -h
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "fuzz-test-targets"
- name: Set Rust Fuzz
shell: bash
run: |
sudo apt-get install -y libfuzzer-14-dev
rustup install nightly
cargo +nightly install cargo-fuzz cargo-gc-bin
- name: Download pre-built binaries
uses: actions/download-artifact@v4
with:
name: bins
path: .
- name: Unzip binaries
run: |
tar -xvf ./bins.tar.gz
rm ./bins.tar.gz
- name: Run GreptimeDB
run: |
./bins/greptime standalone start&
- name: Fuzz Test
uses: ./.github/actions/fuzz-test
env:
CUSTOM_LIBFUZZER_PATH: /usr/lib/llvm-14/lib/libFuzzer.a
GT_MYSQL_ADDR: 127.0.0.1:4002
with:
target: ${{ matrix.target }}
max-total-time: 120
unstable-fuzztest:
name: Unstable Fuzz Test
needs: build-greptime-ci
runs-on: ubuntu-latest
timeout-minutes: 60
strategy:
matrix:
target: [ "unstable_fuzz_create_table_standalone" ]
steps:
- name: Remove unused software
run: |
echo "Disk space before:"
df -h
[[ -d /usr/share/dotnet ]] && sudo rm -rf /usr/share/dotnet
[[ -d /usr/local/lib/android ]] && sudo rm -rf /usr/local/lib/android
[[ -d /opt/ghc ]] && sudo rm -rf /opt/ghc
[[ -d /opt/hostedtoolcache/CodeQL ]] && sudo rm -rf /opt/hostedtoolcache/CodeQL
sudo docker image prune --all --force
sudo docker builder prune -a
echo "Disk space after:"
df -h
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "fuzz-test-targets"
- name: Set Rust Fuzz
shell: bash
run: |
sudo apt update && sudo apt install -y libfuzzer-14-dev
cargo install cargo-fuzz cargo-gc-bin
- name: Download pre-built binariy
uses: actions/download-artifact@v4
with:
name: bin
path: .
- name: Unzip bianry
run: |
tar -xvf ./bin.tar.gz
rm ./bin.tar.gz
- name: Run Fuzz Test
uses: ./.github/actions/fuzz-test
env:
CUSTOM_LIBFUZZER_PATH: /usr/lib/llvm-14/lib/libFuzzer.a
GT_MYSQL_ADDR: 127.0.0.1:4002
GT_FUZZ_BINARY_PATH: ./bin/greptime
GT_FUZZ_INSTANCE_ROOT_DIR: /tmp/unstable-greptime/
with:
target: ${{ matrix.target }}
max-total-time: 120
unstable: 'true'
- name: Upload unstable fuzz test logs
if: failure()
uses: actions/upload-artifact@v4
with:
name: unstable-fuzz-logs
path: /tmp/unstable-greptime/
retention-days: 3
build-greptime-ci:
name: Build GreptimeDB binary (profile-CI)
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-20.04 ]
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
- uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "build-greptime-ci"
- name: Install cargo-gc-bin
shell: bash
run: cargo install cargo-gc-bin
- name: Build greptime bianry
shell: bash
# `cargo gc` will invoke `cargo build` with specified args
run: cargo gc --profile ci -- --bin greptime
- name: Pack greptime binary
shell: bash
run: |
mkdir bin && \
mv ./target/ci/greptime bin
- name: Print greptime binaries info
run: ls -lh bin
- name: Upload artifacts
uses: ./.github/actions/upload-artifacts
with:
artifacts-dir: bin
version: current
distributed-fuzztest:
name: Fuzz Test (Distributed, ${{ matrix.mode.name }}, ${{ matrix.target }})
runs-on: ubuntu-latest
needs: build-greptime-ci
timeout-minutes: 60
strategy:
matrix:
target: [ "fuzz_create_table", "fuzz_alter_table", "fuzz_create_database", "fuzz_create_logical_table", "fuzz_alter_logical_table", "fuzz_insert", "fuzz_insert_logical_table" ]
mode:
- name: "Remote WAL"
minio: true
kafka: true
values: "with-remote-wal.yaml"
steps:
- name: Remove unused software
run: |
echo "Disk space before:"
df -h
[[ -d /usr/share/dotnet ]] && sudo rm -rf /usr/share/dotnet
[[ -d /usr/local/lib/android ]] && sudo rm -rf /usr/local/lib/android
[[ -d /opt/ghc ]] && sudo rm -rf /opt/ghc
[[ -d /opt/hostedtoolcache/CodeQL ]] && sudo rm -rf /opt/hostedtoolcache/CodeQL
sudo docker image prune --all --force
sudo docker builder prune -a
echo "Disk space after:"
df -h
- uses: actions/checkout@v4
- name: Setup Kind
uses: ./.github/actions/setup-kind
- if: matrix.mode.minio
name: Setup Minio
uses: ./.github/actions/setup-minio
- if: matrix.mode.kafka
name: Setup Kafka cluser
uses: ./.github/actions/setup-kafka-cluster
- name: Setup Etcd cluser
uses: ./.github/actions/setup-etcd-cluster
# Prepares for fuzz tests
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "fuzz-test-targets"
- name: Set Rust Fuzz
shell: bash
run: |
sudo apt-get install -y libfuzzer-14-dev
rustup install nightly
cargo +nightly install cargo-fuzz cargo-gc-bin
# Downloads ci image
- name: Download pre-built binariy
uses: actions/download-artifact@v4
with:
name: bin
path: .
- name: Unzip binary
run: |
tar -xvf ./bin.tar.gz
rm ./bin.tar.gz
- name: Build and push GreptimeDB image
uses: ./.github/actions/build-and-push-ci-image
- name: Wait for etcd
run: |
kubectl wait \
--for=condition=Ready \
pod -l app.kubernetes.io/instance=etcd \
--timeout=120s \
-n etcd-cluster
- if: matrix.mode.minio
name: Wait for minio
run: |
kubectl wait \
--for=condition=Ready \
pod -l app=minio \
--timeout=120s \
-n minio
- if: matrix.mode.kafka
name: Wait for kafka
run: |
kubectl wait \
--for=condition=Ready \
pod -l app.kubernetes.io/instance=kafka \
--timeout=120s \
-n kafka-cluster
- name: Print etcd info
shell: bash
run: kubectl get all --show-labels -n etcd-cluster
# Setup cluster for test
- name: Setup GreptimeDB cluster
uses: ./.github/actions/setup-greptimedb-cluster
with:
image-registry: localhost:5001
values-filename: ${{ matrix.mode.values }}
- name: Port forward (mysql)
run: |
kubectl port-forward service/my-greptimedb-frontend 4002:4002 -n my-greptimedb&
- name: Fuzz Test
uses: ./.github/actions/fuzz-test
env:
CUSTOM_LIBFUZZER_PATH: /usr/lib/llvm-14/lib/libFuzzer.a
GT_MYSQL_ADDR: 127.0.0.1:4002
with:
target: ${{ matrix.target }}
max-total-time: 120
- name: Describe Nodes
if: failure()
shell: bash
run: |
kubectl describe nodes
- name: Export kind logs
if: failure()
shell: bash
run: |
kind export logs /tmp/kind
- name: Upload logs
if: failure()
uses: actions/upload-artifact@v4
with:
name: fuzz-tests-kind-logs-${{ matrix.mode.name }}-${{ matrix.target }}
path: /tmp/kind
retention-days: 3
- name: Delete cluster
if: success()
shell: bash
run: |
kind delete cluster
docker stop $(docker ps -a -q)
docker rm $(docker ps -a -q)
docker system prune -f
distributed-fuzztest-with-chaos:
name: Fuzz Test with Chaos (Distributed, ${{ matrix.mode.name }}, ${{ matrix.target }})
runs-on: ubuntu-latest
needs: build-greptime-ci
timeout-minutes: 60
strategy:
matrix:
target: ["fuzz_migrate_mito_regions", "fuzz_migrate_metric_regions", "fuzz_failover_mito_regions", "fuzz_failover_metric_regions"]
mode:
- name: "Remote WAL"
minio: true
kafka: true
values: "with-remote-wal.yaml"
include:
- target: "fuzz_migrate_mito_regions"
mode:
name: "Local WAL"
minio: true
kafka: false
values: "with-minio.yaml"
- target: "fuzz_migrate_metric_regions"
mode:
name: "Local WAL"
minio: true
kafka: false
values: "with-minio.yaml"
steps:
- name: Remove unused software
run: |
echo "Disk space before:"
df -h
[[ -d /usr/share/dotnet ]] && sudo rm -rf /usr/share/dotnet
[[ -d /usr/local/lib/android ]] && sudo rm -rf /usr/local/lib/android
[[ -d /opt/ghc ]] && sudo rm -rf /opt/ghc
[[ -d /opt/hostedtoolcache/CodeQL ]] && sudo rm -rf /opt/hostedtoolcache/CodeQL
sudo docker image prune --all --force
sudo docker builder prune -a
echo "Disk space after:"
df -h
- uses: actions/checkout@v4
- name: Setup Kind
uses: ./.github/actions/setup-kind
- name: Setup Chaos Mesh
uses: ./.github/actions/setup-chaos
- if: matrix.mode.minio
name: Setup Minio
uses: ./.github/actions/setup-minio
- if: matrix.mode.kafka
name: Setup Kafka cluser
uses: ./.github/actions/setup-kafka-cluster
- name: Setup Etcd cluser
uses: ./.github/actions/setup-etcd-cluster
# Prepares for fuzz tests
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "fuzz-test-targets"
- name: Set Rust Fuzz
shell: bash
run: |
sudo apt-get install -y libfuzzer-14-dev
rustup install nightly
cargo +nightly install cargo-fuzz cargo-gc-bin
# Downloads ci image
- name: Download pre-built binariy
uses: actions/download-artifact@v4
with:
name: bin
path: .
- name: Unzip binary
run: |
tar -xvf ./bin.tar.gz
rm ./bin.tar.gz
- name: Build and push GreptimeDB image
uses: ./.github/actions/build-and-push-ci-image
- name: Wait for etcd
run: |
kubectl wait \
--for=condition=Ready \
pod -l app.kubernetes.io/instance=etcd \
--timeout=120s \
-n etcd-cluster
- if: matrix.mode.minio
name: Wait for minio
run: |
kubectl wait \
--for=condition=Ready \
pod -l app=minio \
--timeout=120s \
-n minio
- if: matrix.mode.kafka
name: Wait for kafka
run: |
kubectl wait \
--for=condition=Ready \
pod -l app.kubernetes.io/instance=kafka \
--timeout=120s \
-n kafka-cluster
- name: Print etcd info
shell: bash
run: kubectl get all --show-labels -n etcd-cluster
# Setup cluster for test
- name: Setup GreptimeDB cluster
uses: ./.github/actions/setup-greptimedb-cluster
with:
image-registry: localhost:5001
values-filename: ${{ matrix.mode.values }}
enable-region-failover: ${{ matrix.mode.kafka }}
- name: Port forward (mysql)
run: |
kubectl port-forward service/my-greptimedb-frontend 4002:4002 -n my-greptimedb&
- name: Fuzz Test
uses: ./.github/actions/fuzz-test
env:
CUSTOM_LIBFUZZER_PATH: /usr/lib/llvm-14/lib/libFuzzer.a
GT_MYSQL_ADDR: 127.0.0.1:4002
with:
target: ${{ matrix.target }}
max-total-time: 120
- name: Describe Nodes
if: failure()
shell: bash
run: |
kubectl describe nodes
- name: Export kind logs
if: failure()
shell: bash
run: |
kind export logs /tmp/kind
- name: Upload logs
if: failure()
uses: actions/upload-artifact@v4
with:
name: fuzz-tests-kind-logs-${{ matrix.mode.name }}-${{ matrix.target }}
path: /tmp/kind
retention-days: 3
- name: Delete cluster
if: success()
shell: bash
run: |
kind delete cluster
docker stop $(docker ps -a -q)
docker rm $(docker ps -a -q)
docker system prune -f
sqlness:
name: Sqlness Test (${{ matrix.mode.name }})
needs: build
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-20.04 ]
mode:
- name: "Basic"
opts: ""
kafka: false
- name: "Remote WAL"
opts: "-w kafka -k 127.0.0.1:9092"
kafka: true
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- if: matrix.mode.kafka
name: Setup kafka server
working-directory: tests-integration/fixtures/kafka
run: docker compose -f docker-compose-standalone.yml up -d --wait
- name: Download pre-built binaries
uses: actions/download-artifact@v4
with:
name: bins
path: .
- name: Unzip binaries
run: tar -xvf ./bins.tar.gz
- name: Run sqlness
run: RUST_BACKTRACE=1 ./bins/sqlness-runner ${{ matrix.mode.opts }} -c ./tests/cases --bins-dir ./bins --preserve-state
- name: Upload sqlness logs
if: failure()
uses: actions/upload-artifact@v4
with:
name: sqlness-logs-${{ matrix.mode.name }}
path: /tmp/sqlness*
retention-days: 3
fmt:
name: Rustfmt
runs-on: ubuntu-20.04
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
with:
components: rustfmt
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
shared-key: "check-rust-fmt"
- name: Check format
run: make fmt-check
clippy:
name: Clippy
runs-on: ubuntu-20.04
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: actions-rust-lang/setup-rust-toolchain@v1
with:
components: clippy
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares across multiple jobs
# Shares with `Check` job
shared-key: "check-lint"
- name: Run cargo clippy
run: make clippy
coverage:
if: github.event.pull_request.draft == false
runs-on: ubuntu-20.04-8-cores
timeout-minutes: 60
steps:
- uses: actions/checkout@v4
- uses: arduino/setup-protoc@v3
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: KyleMayes/install-llvm-action@v1
with:
version: "14.0"
- name: Install toolchain
uses: actions-rust-lang/setup-rust-toolchain@v1
with:
components: llvm-tools-preview
- name: Rust Cache
uses: Swatinem/rust-cache@v2
with:
# Shares cross multiple jobs
shared-key: "coverage-test"
- name: Docker Cache
uses: ScribeMD/docker-cache@0.3.7
with:
key: docker-${{ runner.os }}-coverage
- name: Install latest nextest release
uses: taiki-e/install-action@nextest
- name: Install cargo-llvm-cov
uses: taiki-e/install-action@cargo-llvm-cov
- name: Install Python
uses: actions/setup-python@v5
with:
python-version: '3.10'
- name: Install PyArrow Package
run: pip install pyarrow numpy
- name: Setup etcd server
working-directory: tests-integration/fixtures/etcd
run: docker compose -f docker-compose-standalone.yml up -d --wait
- name: Setup kafka server
working-directory: tests-integration/fixtures/kafka
run: docker compose -f docker-compose-standalone.yml up -d --wait
- name: Setup minio
working-directory: tests-integration/fixtures/minio
run: docker compose -f docker-compose-standalone.yml up -d --wait
- name: Setup postgres server
working-directory: tests-integration/fixtures/postgres
run: docker compose -f docker-compose-standalone.yml up -d --wait
- name: Run nextest cases
run: cargo llvm-cov nextest --workspace --lcov --output-path lcov.info -F pyo3_backend -F dashboard
env:
CARGO_BUILD_RUSTFLAGS: "-C link-arg=-fuse-ld=lld"
RUST_BACKTRACE: 1
CARGO_INCREMENTAL: 0
GT_S3_BUCKET: ${{ vars.AWS_CI_TEST_BUCKET }}
GT_S3_ACCESS_KEY_ID: ${{ secrets.AWS_CI_TEST_ACCESS_KEY_ID }}
GT_S3_ACCESS_KEY: ${{ secrets.AWS_CI_TEST_SECRET_ACCESS_KEY }}
GT_S3_REGION: ${{ vars.AWS_CI_TEST_BUCKET_REGION }}
GT_MINIO_BUCKET: greptime
GT_MINIO_ACCESS_KEY_ID: superpower_ci_user
GT_MINIO_ACCESS_KEY: superpower_password
GT_MINIO_REGION: us-west-2
GT_MINIO_ENDPOINT_URL: http://127.0.0.1:9000
GT_ETCD_ENDPOINTS: http://127.0.0.1:2379
GT_POSTGRES_ENDPOINTS: postgres://greptimedb:admin@127.0.0.1:5432/postgres
GT_KAFKA_ENDPOINTS: 127.0.0.1:9092
GT_KAFKA_SASL_ENDPOINTS: 127.0.0.1:9093
UNITTEST_LOG_DIR: "__unittest_logs"
- name: Codecov upload
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
files: ./lcov.info
flags: rust
fail_ci_if_error: false
verbose: true
# compat:
# name: Compatibility Test
# needs: build
# runs-on: ubuntu-20.04
# timeout-minutes: 60
# steps:
# - uses: actions/checkout@v4
# - name: Download pre-built binaries
# uses: actions/download-artifact@v4
# with:
# name: bins
# path: .
# - name: Unzip binaries
# run: |
# mkdir -p ./bins/current
# tar -xvf ./bins.tar.gz --strip-components=1 -C ./bins/current
# - run: ./tests/compat/test-compat.sh 0.6.0