Current work in progress

WAVES: a Web Application for Versatile Enhanced Bioinformatic Services

Waves

Proof of concept of structured data implementation

Type of implementation

Testing implementations of structured data in Waves web page using:

• Microdata
• JSON-LD in <script></script>

Uppon testing, we are thinking that it is easier to use JSON-LD for a first implementation in an already existing web application.

Ontology used

First, we are testing basic implementation of Schema.org Ontology.
We are looking forward to use BioSchema.org which is more domain specific.

First implementation

At the time we are in discussion to determine which classes, properties and associated values we will first implement.

Classe and preperties used:

• SoftwareApplication
  • name: Waves
  • description: ?
  • url: http://www.atgc-montpellier.fr/waves/
  • applicationCategory: WebApp ?
  • operatingSystem: Linux ?

FAIRMetrics

Resources

Github

FAIRMetrics Github

Publications

A design framework and exemplar metrics for FAIRness

Evaluating FAIR maturity through a scalable, automated, community-governed framework.

Testing FAIRMetrics evaluating many DOIs/URLs from different resources

Resources tested:

• Zenodo
• Pubmed
• PANGEAE
• Uniprot

Script developped to call FAIRMetrics using smartapi

https://github.com/IFB-ElixirFr/interop-wg/tree/master/fairmetrics_interface_tests

FAIR Evaluation Services

Description

Online tool to evaluate a GUID (DOI, etc) giving and ORCiD to be associated with the evaluation
FAIR Evaluation Services

Github

FAIRsharing/FAIR-Evaluator-FrontEnd

Uses AngularJS Web Framework

IFB Catalog

Working on the implementation of structured and linked data in the IFB resources catalog.

Survey about needs and practices concerning FAIRdata of IFB platforms in France

Purpose

We are creating a survey that is aimed at evaluating the means in place to follow FAIR principles in platforms that are part of IFB.

Results

Not available yet.