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Release v0.1.0 #33

Merged
merged 146 commits into from
Aug 23, 2023
Merged

Release v0.1.0 #33

merged 146 commits into from
Aug 23, 2023

Commits on Jan 5, 2023

  1. update dependencies

    @crvernon
    crvernon committed Jan 5, 2023
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  2. add data loading protocol

    @crvernon
    crvernon committed Jan 5, 2023
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  3. add function for flow generation

    @crvernon
    crvernon committed Jan 5, 2023
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  4. working

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  5. nojekyll for github pages

    @crvernon
    crvernon committed Jan 5, 2023
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  6. update docstring for modify_ddm function

    @crvernon
    crvernon committed Jan 5, 2023
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  7. add example to docstring for modify_ddm function

    @crvernon
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  8. update docstring for modify_eva function

    @crvernon
    crvernon committed Jan 5, 2023
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  9. update codeblock examples

    @crvernon
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  10. update docs templates

    @crvernon
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Commits on Jan 10, 2023

  1. add XddConverter for parsing xdd files to parquet

    @thurber
    thurber committed Jan 10, 2023
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  2. add deps to setup.py

    @thurber
    thurber committed Jan 10, 2023
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  3. add XddConverter to README

    @thurber
    thurber committed Jan 10, 2023
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  4. allow classless conversion of xdd files; update documentation

    @thurber
    thurber committed Jan 10, 2023
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  5. Merge pull request #15 from IMMM-SFA/feature/output-processing 

    add XddConverter for parsing output files to parquet
    @thurber
    thurber authored Jan 10, 2023
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  6. working on generalization

    @crvernon
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Commits on Jan 12, 2023

  1. sample generator generalized code

    @crvernon
    crvernon committed Jan 12, 2023
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  2. tests for sampler

    @crvernon
    crvernon committed Jan 12, 2023
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  3. extract generalized functions from eva code

    @crvernon
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  4. add test file to data in package

    @crvernon
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  5. remove transpose from sample generator

    @crvernon
    crvernon committed Jan 12, 2023
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  6. add tests and setup for eva

    @crvernon
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  7. update sampler to fill names if needed

    @crvernon
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  8. remove unneccesary parens

    @crvernon
    crvernon committed Jan 12, 2023
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  9. enable fill for names for eva function

    @crvernon
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  10. Merge branch 'bug/eva' into dev

    @crvernon
    crvernon authored Jan 12, 2023
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  11. Merge pull request #17 from IMMM-SFA/dev 

    Bring in dev to ameliorate merge conflicts
    @crvernon
    crvernon authored Jan 12, 2023
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  12. Revert "Repair and update current functionality for eva file modifi… 

    …cation"
    @crvernon
    crvernon authored Jan 12, 2023
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  13. Merge pull request #18 from IMMM-SFA/revert-16-bug/eva 

    Revert "Repair and update current functionality for `eva` file modification"
    @crvernon
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  14. update docs for API

    @crvernon
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Commits on Jan 16, 2023

  1. add validate bounds param

    @crvernon
    crvernon committed Jan 16, 2023
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  2. add tests for validate bounds

    @crvernon
    crvernon committed Jan 16, 2023
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  3. option for eva to use factor method

    @crvernon
    crvernon committed Jan 16, 2023
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  4. fix notice message

    @crvernon
    crvernon committed Jan 16, 2023
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  5. fix test failure due to factor add

    @crvernon
    crvernon committed Jan 16, 2023
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  6. add in validation of bounds to eva

    @crvernon
    crvernon committed Jan 16, 2023
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Commits on Jan 17, 2023

  1. fix merge conflicts

    @crvernon
    crvernon committed Jan 17, 2023
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  2. fix merge issues

    @crvernon
    crvernon committed Jan 17, 2023
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  3. update files from merge

    @crvernon
    crvernon committed Jan 17, 2023
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  4. Merge pull request #19 from IMMM-SFA/bug/eva 

    Repair and update current functionality for `eva` file modification
    @crvernon
    crvernon authored Jan 17, 2023
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  5. reconfigure utils to modify and add flexible config for versions

    @crvernon
    crvernon committed Jan 17, 2023
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  6. change import from utils to modify

    @crvernon
    crvernon committed Jan 17, 2023
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  7. add tests for data class

    @crvernon
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  8. working on eva rebase to new generalization

    @crvernon
    crvernon committed Jan 17, 2023
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Commits on Jan 18, 2023

  1. add eva data spec template yaml

    @crvernon
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  2. setup ddm modifer and tests

    @crvernon
    crvernon committed Jan 18, 2023
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  3. ensure correct precision and format for ddm

    @crvernon
    crvernon committed Jan 18, 2023
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  4. fix typo in test

    @crvernon
    crvernon committed Jan 18, 2023
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  5. initial ddr data spec yaml

    @crvernon
    crvernon committed Jan 18, 2023
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  6. working on ddr setup

    @crvernon
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  7. fix typo in docstrings

    @crvernon
    crvernon committed Jan 18, 2023
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  8. Merge pull request #20 from IMMM-SFA/bug/ddm 

    Generalization of modification for DDM and EVA files
    @crvernon
    crvernon authored Jan 18, 2023
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  9. initial ddr decree mod feature

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Commits on Jan 19, 2023

  1. functionality for on_off modification to ddr

    @crvernon
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  2. start working on ddr admin ranking

    @crvernon
    crvernon committed Jan 19, 2023
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Commits on Jan 30, 2023

  1. working on ddr value set

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Commits on Jan 31, 2023

  1. set ddr tests

    @crvernon
    crvernon committed Jan 31, 2023
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  2. only run sampler when needed

    @crvernon
    crvernon committed Jan 31, 2023
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  3. add option for seniority setting

    @crvernon
    crvernon committed Jan 31, 2023
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  4. add test for seniority setting

    @crvernon
    crvernon committed Jan 31, 2023
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  5. merge upstream feature branch

    @crvernon
    crvernon committed Jan 31, 2023
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  6. update docs

    @crvernon
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  7. add refs

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Commits on Feb 1, 2023

  1. fix admin seniority trailing zeros

    @crvernon
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  2. Merge branch 'feature/ddr' into feature/xbm-iwr

    @crvernon
    crvernon committed Feb 1, 2023
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Commits on Feb 18, 2023

  1. add template xbm and iwr files

    @crvernon
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  2. working in disagg for xbm iwr

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Commits on Feb 19, 2023

  1. add in options for replace in modify

    @crvernon
    crvernon committed Feb 19, 2023
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  2. add iwr spec sheet

    @crvernon
    crvernon committed Feb 19, 2023
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  3. prep for xbm iwr fit

    @crvernon
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  4. set data spec classes and initiate hmm workhorse fn

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Commits on Mar 22, 2023

  1. working

    @crvernon
    crvernon committed Mar 22, 2023
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  2. fix pyversion ref

    @crvernon
    crvernon committed Mar 22, 2023
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Commits on Mar 23, 2023

  1. initialize quickstarter

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Commits on Mar 24, 2023

  1. roll credits

    @crvernon
    crvernon committed Mar 24, 2023
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  2. Merge pull request #22 from IMMM-SFA/feature/credits 

    roll credits
    @crvernon
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  3. fix package dep

    @crvernon
    crvernon committed Mar 24, 2023
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Commits on Mar 27, 2023

  1. working

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Commits on Mar 30, 2023

  1. new spec for hmm xbm iwr

    @crvernon
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  2. prep sample builder for xbm iwr

    @crvernon
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Commits on Mar 31, 2023

  1. add full build of lhs

    @crvernon
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  2. update doc string with example

    @crvernon
    crvernon committed Mar 31, 2023
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  3. update full sampler

    @crvernon
    crvernon committed Mar 31, 2023
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  4. fix missing test argument

    @crvernon
    crvernon committed Mar 31, 2023
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  5. functional test

    @crvernon
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  6. suppress runtime warning

    @crvernon
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Commits on Apr 1, 2023

  1. working on res

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Commits on Apr 2, 2023

  1. fix true divide

    @crvernon
    crvernon committed Apr 2, 2023
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Commits on Apr 3, 2023

  1. initial res mod code

    @crvernon
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  2. add docstring to single mod fn

    @crvernon
    crvernon committed Apr 3, 2023
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  3. add fn to get list of all structure ids

    @crvernon
    crvernon committed Apr 3, 2023
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  4. add sampling fn for parallel

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  5. fix structure id out list fn

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Commits on Apr 5, 2023

  1. multiply sto-1 by sample

    @crvernon
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  2. add ignore phantom structures

    @crvernon
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  3. add tests

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Commits on Apr 6, 2023

  1. Merge pull request #24 from IMMM-SFA/feature/res 

    Modify reservoir input
    @crvernon
    crvernon authored Apr 6, 2023
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  2. Merge branch 'dev' into feature/xbm-iwr 

    bring in res branch updates
    @crvernon
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  3. Merge pull request #23 from IMMM-SFA/feature/xbm-iwr 

    Modify XBM and IWR with HMM
    @crvernon
    crvernon authored Apr 6, 2023
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  4. generalize templates for xbm-iwr

    @crvernon
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  5. generalize templates for ddm

    @crvernon
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  6. generalize templates for ddr

    @crvernon
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  7. generalize templates for eva

    @crvernon
    crvernon committed Apr 6, 2023
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  8. generalize templates for res

    @crvernon
    crvernon committed Apr 6, 2023
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  9. remove old test data

    @crvernon
    crvernon committed Apr 6, 2023
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  10. fix template test

    @crvernon
    crvernon committed Apr 6, 2023
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  11. fix tests

    @crvernon
    crvernon committed Apr 6, 2023
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Commits on Apr 11, 2023

  1. fix covariance multiplier

    @crvernon
    crvernon committed Apr 11, 2023
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Commits on Apr 13, 2023

  1. Merge pull request #26 from IMMM-SFA/feature/hmm 

    Fix covariance multiplier
    @crvernon
    crvernon authored Apr 13, 2023
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  2. Merge pull request #25 from IMMM-SFA/feature/templates 

    Generalize templates to all basins
    @crvernon
    crvernon authored Apr 13, 2023
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  3. add save_sample option to write sample to file

    @crvernon
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  4. Merge pull request #27 from IMMM-SFA/feature/return-sample 

    Add save_sample option to write sample to file
    @crvernon
    crvernon authored Apr 13, 2023
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Commits on May 18, 2023

  1. change output file name format

    @crvernon
    crvernon committed May 18, 2023
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  2. remove declaration of names

    @crvernon
    crvernon committed May 18, 2023
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  3. remove declaration of names

    @crvernon
    crvernon committed May 18, 2023
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Commits on May 19, 2023

  1. use only ids for sample

    @crvernon
    crvernon committed May 19, 2023
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  2. change ddm tests to new format

    @crvernon
    crvernon committed May 19, 2023
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  3. update ddr with new modify dict format

    @crvernon
    crvernon committed May 19, 2023
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  4. update eva with new modifiy dict protocol

    @crvernon
    crvernon committed May 19, 2023
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  5. remove unneeded data

    @crvernon
    crvernon committed May 19, 2023
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  6. update res protocol for output file name

    @crvernon
    crvernon committed May 19, 2023
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  7. remove unneeded file

    @crvernon
    crvernon committed May 19, 2023
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  8. update output file name protocol for xbm iwr

    @crvernon
    crvernon committed May 19, 2023
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  9. reconfigure tests to account for changes

    @crvernon
    crvernon committed May 19, 2023
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  10. fix docstring

    @crvernon
    crvernon committed May 19, 2023
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  11. remove hardcoded path

    @crvernon
    crvernon committed May 19, 2023
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  12. set optional bounds value in dict

    @crvernon
    crvernon committed May 19, 2023
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  13. add xre extractor functionality and tests

    @crvernon
    crvernon committed May 19, 2023
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  14. add xre templates for all basins

    @crvernon
    crvernon committed May 19, 2023
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  15. make res sample only include rstorage

    @crvernon
    crvernon committed May 19, 2023
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  16. Merge pull request #30 from IMMM-SFA/bug/res-sample 

    make res sample only include rstorage
    @crvernon
    crvernon authored May 19, 2023
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  17. add baseline B to each template as suffix

    @crvernon
    crvernon committed May 19, 2023
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  18. file name in test adjustment

    @crvernon
    crvernon committed May 19, 2023
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  19. Merge branch 'feature/xre' of https://github.com/IMMM-SFA/statemodify … 

    …into feature/xre
    @crvernon
    crvernon committed May 19, 2023
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  20. Merge pull request #29 from IMMM-SFA/feature/xre 

    add in xre basin extraction function
    @crvernon
    crvernon authored May 19, 2023
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  21. Merge pull request #28 from IMMM-SFA/feature/ddm-sampler 

    output file name formatting and input dict modification
    @crvernon
    crvernon authored May 19, 2023
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Commits on May 25, 2023

  1. add sample array as an external option

    @crvernon
    crvernon committed May 25, 2023
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  2. add batch processing functionality

    @crvernon
    crvernon committed May 25, 2023
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  3. Merge pull request #31 from IMMM-SFA/feature/batch 

    Allow batch sampling for multiple functions
    @crvernon
    crvernon authored May 25, 2023
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  4. update ddr sampling scheme in batch function

    @crvernon
    crvernon committed May 25, 2023
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Commits on Jul 26, 2023

  1. update to new hmm and plotting

    @crvernon
    crvernon committed Jul 26, 2023
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  2. add missing test data

    @crvernon
    crvernon committed Jul 26, 2023
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  3. add missing comma

    @crvernon
    crvernon committed Jul 26, 2023
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  4. update api docs

    @crvernon
    crvernon committed Jul 26, 2023
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Commits on Aug 1, 2023

  1. Merge pull request #32 from IMMM-SFA/feature/trace 

    Update to new HMM approach
    @rg727
    rg727 authored Aug 1, 2023
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  2. removed extra parenthesis in hmm.py file

    Rohini Gupta committed Aug 1, 2023
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