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Litter model theory and implementation docs #593

Merged
merged 41 commits into from
Oct 22, 2024
Merged

Litter model theory and implementation docs #593

merged 41 commits into from
Oct 22, 2024

Commits on Jul 31, 2024

  1. Added automatic variable documentation to litter model implementation… 

    … docs
    @jacobcook1995
    jacobcook1995 committed Jul 31, 2024
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  2. Made a seperate page for the litter theory

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    jacobcook1995 committed Jul 31, 2024
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  3. Added a new higher level decay theory docs page

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    jacobcook1995 committed Jul 31, 2024
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  4. Moved decay documentation to it's own subfolder

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    jacobcook1995 committed Jul 31, 2024
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  5. Added new decay theory pages into the toc tree

    @jacobcook1995
    jacobcook1995 committed Jul 31, 2024
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Commits on Aug 2, 2024

  1. Added a small amount of text explaining litter soil model split

    @jacobcook1995
    jacobcook1995 committed Aug 2, 2024
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Commits on Aug 15, 2024

  1. Added a justification for the relatively simple litter model

    @jacobcook1995
    jacobcook1995 committed Aug 15, 2024
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  2. Improved justification for the relatively simple litter model

    @jacobcook1995
    jacobcook1995 committed Aug 15, 2024
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  3. Updated litter implementation TODO

    @jacobcook1995
    jacobcook1995 committed Aug 15, 2024
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  4. fixed outdated docs links

    @jacobcook1995
    jacobcook1995 committed Aug 15, 2024
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  5. Fixed typos in decay theory frontpage

    @jacobcook1995
    jacobcook1995 committed Aug 15, 2024
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  6. Added introduction to new litter theory page

    @jacobcook1995
    jacobcook1995 committed Aug 15, 2024
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  7. Updated litter pool details to fit new docs structure

    @jacobcook1995
    jacobcook1995 committed Aug 15, 2024
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Commits on Sep 3, 2024

  1. Added documentation for lignin impact on litter decay

    @jacobcook1995
    jacobcook1995 committed Sep 3, 2024
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  2. Merge branch 'develop' into 513-litter-model-documentation

    @jacobcook1995
    jacobcook1995 committed Sep 3, 2024
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Commits on Sep 16, 2024

  1. Added basic explanation of litter input partition to the docs

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    jacobcook1995 committed Sep 16, 2024
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  2. Merge branch 'develop' into 513-litter-model-documentation

    @jacobcook1995
    jacobcook1995 committed Sep 16, 2024
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  3. Fleshed out docs section on litter input partition

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    jacobcook1995 committed Sep 16, 2024
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Commits on Sep 26, 2024

  1. Merge branch 'develop' into 513-litter-model-documentation

    @jacobcook1995
    jacobcook1995 committed Sep 26, 2024
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  2. Added paragraph on how temperature dependance is captured

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    jacobcook1995 committed Sep 26, 2024
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Commits on Oct 11, 2024

  1. Added an explanation of animal model links to the litter documentation

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    jacobcook1995 committed Oct 11, 2024
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  2. Made landing page for animal theory and linked a page on excrement an… 

    …d carcasses to it
    @jacobcook1995
    jacobcook1995 committed Oct 11, 2024
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  3. Added decription of soil moisture limitation to the litter documentation

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    jacobcook1995 committed Oct 11, 2024
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  4. Merge branch 'develop' into 513-litter-model-documentation

    @jacobcook1995
    jacobcook1995 committed Oct 11, 2024
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Commits on Oct 14, 2024

  1. Added commas after equations

    @jacobcook1995
    jacobcook1995 committed Oct 14, 2024
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  2. Wrote theory documentation describing how tracking of excrement and c… 

    …arcasses works
    @jacobcook1995
    jacobcook1995 committed Oct 14, 2024
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  3. Added description of litter model flow to the litter model implementa… 

    …tion docs
    @jacobcook1995
    jacobcook1995 committed Oct 14, 2024
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  4. Edit of litter_implemenatation.md

    @davidorme
    davidorme committed Oct 14, 2024
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  5. Theory of biomass decay update

    @davidorme
    davidorme committed Oct 14, 2024
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  6. Fixing RTD theme issue

    @davidorme
    davidorme committed Oct 14, 2024
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Commits on Oct 16, 2024

  1. Addressed Vivienne's comments on the soil_theory docs

    @jacobcook1995
    jacobcook1995 committed Oct 16, 2024
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  2. Merge branch 'develop' into 513-litter-model-documentation

    @jacobcook1995
    jacobcook1995 authored Oct 16, 2024
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  3. Fixed typo in litter theory docs

    @jacobcook1995
    jacobcook1995 committed Oct 16, 2024
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  4. Improved the decay theory based on Vivienne's suggestions

    @jacobcook1995
    jacobcook1995 committed Oct 16, 2024
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  5. Made a seperate environmental impacts doc page

    @jacobcook1995
    jacobcook1995 committed Oct 16, 2024
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  6. Added description of environmental links page to the soil theory summ… 

    …ary page
    @jacobcook1995
    jacobcook1995 committed Oct 16, 2024
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  7. Updated environmental links docs to not be litter model specific

    @jacobcook1995
    jacobcook1995 committed Oct 16, 2024
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Commits on Oct 17, 2024

  1. Updated into to litter theory page to reflect current content

    @jacobcook1995
    jacobcook1995 committed Oct 17, 2024
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  2. Merge branch 'develop' into 513-litter-model-documentation, adjusted … 

    …new files to properly use juyptext
    @jacobcook1995
    jacobcook1995 committed Oct 17, 2024
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  3. Improved the use of admonition throughout the litter docs

    @jacobcook1995
    jacobcook1995 committed Oct 17, 2024
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Commits on Oct 22, 2024

  1. Merge branch 'develop' into 513-litter-model-documentation

    @jacobcook1995
    jacobcook1995 authored Oct 22, 2024
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