update docker image to install required libraries #6
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| name: Render Quarto Files and Deploy to GitHub Pages | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: # Manual trigger | |
| jobs: | |
| render_quarto: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| - name: Build Docker image | |
| run: | | |
| docker build -t demo-quarto-image . | |
| - name: Run Quarto in Docker container | |
| run: | | |
| docker run --rm -v ${{ github.workspace }}:/workspace -w /workspace demo-quarto-image bash -c " | |
| echo 'Creating gallery directory...' | |
| mkdir -p gallery && \ | |
| echo 'gallery directory created.' | |
| FOLDERS=(python R) | |
| echo 'Folders to process: ${FOLDERS[@]}' | |
| for FOLDER in \"\${FOLDERS[@]}\"; do | |
| echo 'Searching for .qmd and .ipynb files in $FOLDER...' | |
| find \"\$FOLDER\" \( -name '*.qmd' -o -name '*.ipynb' \) | while read file; do | |
| echo 'Processing file: $file' | |
| target_dir='gallery/$(dirname \"$file\")' | |
| echo 'Creating target directory: $target_dir' | |
| mkdir -p \"\$target_dir\" && echo 'Directory $target_dir created.' | |
| echo 'Attempting to render $file with execution...' | |
| if quarto render \"\$file\" --to html --output-dir \"\$target_dir\"; then | |
| echo 'Successfully rendered $file with execution.' | |
| else | |
| echo 'Failed to render $file with execution. Rendering without execution...' | |
| if quarto render \"\$file\" --to html --no-execute --output-dir \"\$target_dir\"; then | |
| echo 'Successfully rendered $file without execution.' | |
| else | |
| echo 'Rendering failed for $file, even without execution.' | |
| fi | |
| fi | |
| done | |
| done" | |
| - name: Generate Index HTML | |
| run: | | |
| echo "<html><body><h1>Gallery Index</h1><ul>" > gallery/index.html | |
| find gallery -name "*.html" | while read file; do | |
| file_name=$(basename "$file") | |
| echo "<li><a href=\"./$file\">$file_name</a></li>" >> gallery/index.html | |
| done | |
| echo "</ul></body></html>" >> gallery/index.html | |
| - name: Upload HTML output | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: gallery | |
| path: gallery | |
| - name: Set up Git user | |
| run: | | |
| git config --global user.name 'github-actions[bot]' | |
| git config --global user.email 'github-actions[bot]@users.noreply.github.com' | |
| - name: Commit and Push to docs branch | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| # Fetch all branches | |
| git fetch origin | |
| # Check if the docs branch exists, create it if not | |
| if git show-ref --quiet refs/heads/docs; then | |
| git checkout docs | |
| else | |
| git checkout --orphan docs | |
| fi | |
| # Copy the gallery folder to the root of the docs branch | |
| cp -r gallery/* . | |
| # Add, commit, and push changes | |
| git add gallery | |
| git commit -m "Update rendered Quarto files for GitHub Pages (commit: ${{ github.sha }})" | |
| git push origin docs --force |