DESCRIPTION

Package: DNMB
Title: Comprehensive genomics analysis for the Domestication of Non-Model Bacteria (DNMB)
Version: 1.0.1
Authors@R: 
    person("Jae-Yoon", "Sung", , "o3wodbs@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-2475-8743"))
Description: Our pipeline integrates multiple scripts and computational tools to streamline various stages of genomic analysis, from making comprehensive functional annotation in user-friendly table format to genomic features including codon usage and ribosomal binding site preference and distance. Herein.
License: MIT
Encoding: UTF-8
Depends:
    dplyr
Imports:
    Biostrings,
    ComplexHeatmap,
    Peptides,
    circlize,
    gtools,
    ggplot2,
    ggseqlogo,
    grid,
    gridExtra,
    openxlsx,
    plyr,
    dplyr,
    tidyr,
    readr,
    reshape2,
    seqinr,
    stringr,
    data.table,
    tibble,
    qdap,
    openxlsx
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
Suggests: 
    testthat (>= 3.0.0)
Config/testthat/edition: 3