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WebGL-based viewer for spatially-resolved transcriptomics data

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MERmaid

mermaid logo

WebGL-based viewer for MERFISH data

Online Demo:

https://jef.works/MERmaid/

mermaid demo

Download

Clone repo

git clone https://github.com/JEFworks/MERmaid.git
cd MERmaid

Re-build

Install after cloning and start development server

npm install
npm start

Build for release

npm run-script build

Optional renaming for Github purposes

cp -r build/ docs/
## rename homepage paths in build if needed

Run without re-building

cd build
# Check python version
python -V
# If Python version returned above is 3.X
python -m http.server 8080
# If Python version returned above is 2.X
python -m SimpleHTTPServer 8080

Then point your browser to http://localhost:8080/ Alternatively http://127.0.0.1:8080/

Using your own data

Replace the data.csv.gz file in the build/ folder and follow the Run without re-building steps above.