Add Yale Ventures Non-Commercial License #30
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| name: Unit Tests | |
| on: | |
| push: | |
| branches-ignore: | |
| - 'test_deploy' | |
| pull_request: | |
| branches: | |
| - '*' | |
| jobs: | |
| test_python: | |
| runs-on: ${{ matrix.config.os }} | |
| if: "!contains(github.event.head_commit.message, 'ci skip')" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {name: '3.9', os: ubuntu-latest, python: '3.9' } | |
| - {name: '3.8', os: ubuntu-latest, python: '3.8' } | |
| - {name: '3.7', os: ubuntu-latest, python: '3.7' } | |
| - {name: '3.6', os: ubuntu-latest, python: '3.6' } | |
| steps: | |
| - name: Cancel Previous Runs | |
| uses: styfle/cancel-workflow-action@0.6.0 | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Check Ubuntu version | |
| run: | | |
| echo "UBUNTU_VERSION=`grep DISTRIB_RELEASE /etc/lsb-release | sed 's/.*=//g'`" >> $GITHUB_ENV | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.config.python }} | |
| - name: Cache Python packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: ${{runner.os}}-pip-${{ env.pythonLocation }}-${{ hashFiles('python/setup.py') }} | |
| restore-keys: ${{runner.os}}-pip-${{ env.pythonLocation }}- | |
| - name: Install package & dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -U wheel setuptools | |
| pip install -U ./python[test] | |
| python -c "import magic" | |
| - name: Run Python tests | |
| run: | | |
| cd python | |
| nose2 -vvv | |
| cd .. | |
| - name: Build docs | |
| run: | | |
| cd python | |
| pip install .[doc] | |
| cd doc | |
| make html | |
| cd ../.. | |
| - name: Coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_SERVICE_NAME: github | |
| run: | | |
| coveralls | |
| - name: Upload check results on fail | |
| if: failure() | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: ${{ matrix.config.name }}_results | |
| path: check | |
| test_r: | |
| runs-on: ${{ matrix.config.os }} | |
| if: "!contains(github.event.head_commit.message, 'ci skip')" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {name: 'devel', os: ubuntu-latest, r: 'devel' } | |
| - {name: 'release', os: ubuntu-latest, r: 'release' } | |
| steps: | |
| - name: Cancel Previous Runs | |
| uses: styfle/cancel-workflow-action@0.6.0 | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Set up environment | |
| run: | | |
| echo "UBUNTU_VERSION=`grep DISTRIB_RELEASE /etc/lsb-release | sed 's/.*=//g'`" >> $GITHUB_ENV | |
| mkdir -p .local/R/site-packages | |
| echo "R_LIBS_USER=`pwd`/.local/R/site-packages" >> $GITHUB_ENV | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.8" | |
| - name: Install system dependencies | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update -qq | |
| sudo apt-get install -y libcurl4-openssl-dev pandoc | |
| - name: Cache Python packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| key: ${{runner.os}}-pip-${{ env.pythonLocation }}-${{ hashFiles('python/setup.py') }} | |
| restore-keys: ${{runner.os}}-pip-${{ env.pythonLocation }}- | |
| - name: Install package & dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -U wheel setuptools | |
| pip install -U ./python | |
| python -c "import magic" | |
| - name: Set up R | |
| id: setup-r | |
| uses: r-lib/actions/setup-r@v1 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - name: Cache R packages | |
| uses: actions/cache@v2 | |
| if: startsWith(runner.os, 'Linux') | |
| with: | |
| path: ${{env.R_LIBS_USER}} | |
| key: test-${{env.UBUNTU_VERSION}}-renv-${{ steps.setup-r.outputs.installed-r-version }}-${{ hashFiles('Rmagic/DESCRIPTION') }}- | |
| restore-keys: | | |
| test-${{env.UBUNTU_VERSION}}-renv-${{ steps.setup-r.outputs.installed-r-version }}- | |
| - name: Install R packages | |
| run: | | |
| if (!require("devtools")) install.packages("devtools", repos="http://cloud.r-project.org") | |
| devtools::install_dev_deps("./Rmagic", upgrade=TRUE) | |
| devtools::install("./Rmagic") | |
| shell: Rscript {0} | |
| - name: Install tinytex | |
| uses: r-lib/actions/setup-tinytex@v1 | |
| - name: Run R tests | |
| run: | | |
| cd Rmagic | |
| R CMD build . | |
| R CMD check --as-cran *.tar.gz | |
| cd .. | |
| - name: Upload check results on fail | |
| if: failure() | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: ${{ matrix.config.name }}_results | |
| path: check |