Merge pull request #4 from MatMechLab/devel #121
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| # This is a basic workflow to help you get started with Actions | |
| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: | |
| - 'main' | |
| - 'devel' | |
| pull_request: | |
| types: | |
| - opened | |
| branches: | |
| - 'main' | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| build-AsFem: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v2 | |
| # Runs a single command using the runners shell | |
| - name: show repository information | |
| run: echo ${{github.event.repository.name}} | |
| - name: show CPU information | |
| run: cat /proc/cpuinfo | |
| - name: show file structure | |
| run: | | |
| echo "*********************************************************************" | |
| echo "*** Current path is:" | |
| pwd | |
| echo "*********************************************************************" | |
| echo "*** Current folders are:" | |
| ls -l | |
| - name: check gcc/gfortran/cmake version | |
| run: | | |
| echo "*********************************************************************" | |
| echo "*** Check the version of gnu-c,c++,fortran compiler" | |
| echo "*********************************************************************" | |
| gcc --version | |
| g++ --version | |
| gfortran --version | |
| cmake --version | |
| echo "*********************************************************************" | |
| echo "*** Version check is done !" | |
| echo "*********************************************************************" | |
| - name: create temp folder and lib folder | |
| run: | | |
| echo "*********************************************************************" | |
| echo "*** Current folder structure is:" | |
| ls -l | |
| echo "*********************************************************************" | |
| echo "*** Now we start to create folder" | |
| echo "*********************************************************************" | |
| mkdir temp && mkdir AsFemLibs | |
| ls -l | |
| cd AsFemLibs && mkdir openmpi && mkdir petsc | |
| pwd | |
| echo "*********************************************************************" | |
| echo "*** Now we have the following folders:" | |
| ls -l | |
| - name: download openmpi | |
| run: | | |
| cd temp | |
| ls -l | |
| curl -L -O https://download.open-mpi.org/release/open-mpi/v5.0/openmpi-5.0.1.tar.gz | |
| echo "******************************************************" | |
| echo "*** Openmpi 5.0.1 has been downloaded !" | |
| echo "******************************************************" | |
| ls -l | |
| - name: compile and install openmpi | |
| run: | | |
| echo "******************************************************" | |
| echo "*** Start to compile openmpi-5.0.1" | |
| echo "******************************************************" | |
| cd temp | |
| tar -xf openmpi-5.0.1.tar.gz | |
| cd openmpi-5.0.1 | |
| ./configure --prefix=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi | |
| make -j8 | |
| echo "******************************************************" | |
| echo "*** Make -j8 is done for openmpi-5.0.1" | |
| echo "******************************************************" | |
| make install | |
| echo "******************************************************" | |
| echo "*** Make install is done for openmpi-5.0.1" | |
| echo "******************************************************" | |
| - name: check openmpi version | |
| run: | | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi/bin | |
| echo "******************************************************" | |
| echo "*** Now we check the version of mpicc and mpicxx" | |
| ./mpicc --version | |
| ./mpicxx --version | |
| ./mpirun --version | |
| echo "******************************************************" | |
| - name: downlaod PETSc | |
| run: | | |
| echo "******************************************************" | |
| echo "*** download petsc" | |
| echo "******************************************************" | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/temp | |
| curl -L -O https://web.cels.anl.gov/projects/petsc/download/release-snapshots/petsc-lite-3.20.2.tar.gz | |
| tar -xf petsc-lite-3.20.2.tar.gz | |
| - name: compile and install PETSc | |
| run: | | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/temp/petsc-3.20.2 | |
| echo "******************************************************" | |
| echo "*** Configure petsc ..." | |
| echo "******************************************************" | |
| ./configure \ | |
| --prefix=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/petsc \ | |
| --with-debugging=0 \ | |
| --with-ssl=0 \ | |
| --with-pic=1 \ | |
| --with-openmp=0 \ | |
| --with-mpi-dir=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi \ | |
| --with-shared-libraries=1 \ | |
| --with-fortran-bindings=0 \ | |
| --with-sowing=0 \ | |
| --download-fblaslapack=1 \ | |
| --download-scalapack=1 \ | |
| --download-mumps=1 \ | |
| COPTFLAGS='-fPIC -O3 ' \ | |
| CXXOPTFLAGS='-fPIC -O3 ' \ | |
| FOPTFLAGS='-fPIC -O3 ' \ | |
| PETSC_DIR=`pwd` | |
| echo "******************************************************" | |
| echo "*** Make petsc ..." | |
| echo "******************************************************" | |
| make PETSC_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/temp/petsc-3.20.2 PETSC_ARCH=arch-linux-c-opt all | |
| echo "******************************************************" | |
| echo "*** Install petsc ..." | |
| echo "******************************************************" | |
| make PETSC_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/temp/petsc-3.20.2 PETSC_ARCH=arch-linux-c-opt install | |
| - name: compile AsFem | |
| run: | | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}} | |
| echo "*********************************************************************" | |
| echo "*** Setup mpi and petsc bash profile" | |
| echo "*********************************************************************" | |
| export MPI_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi | |
| export PATH=$PATH:$MPI_DIR/bin | |
| export CC=$MPI_DIR/bin/mpicc | |
| export CXX=$MPI_DIR/bin/mpicxx | |
| export F90=$MPI_DIR/bin/mpif90 | |
| export F77=$MPI_DIR/bin/mpif77 | |
| export OMP_NUM_THREADS=1 | |
| export PETSC_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/petsc | |
| export C_INCLUDE_PATH=$mpi/include:$C_INCLUDE_PATH | |
| export CPLUS_INCLUDE_PATH=$mpi/include:$CPLUS_INCLUDE_PATH | |
| export FPATH=$mpi/include:$FPATH | |
| export MANPATH=$mpi/share/man:$MANPATH | |
| export LD_LIBRARY_PATH=$mpi/lib:$LD_LIBRARY_PATH | |
| cmake CMakeLists.txt -DCMAKE_BUILD_TYPE=Release | |
| echo "*********************************************************************" | |
| echo "*** Make AsFem" | |
| echo "*********************************************************************" | |
| make -j8 | |
| echo "*********************************************************************" | |
| echo "*** AsFem has been successuflly installed !" | |
| echo "*********************************************************************" | |
| ls | |
| - name: run AsFem test script | |
| run: | | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}} | |
| echo "*********************************************************************" | |
| echo "*** Start to run AsFem autotest" | |
| echo "*********************************************************************" | |
| ls | |
| export MPI_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi | |
| export PATH=$PATH:$MPI_DIR/bin | |
| export CC=$MPI_DIR/bin/mpicc | |
| export CXX=$MPI_DIR/bin/mpicxx | |
| export F90=$MPI_DIR/bin/mpif90 | |
| export F77=$MPI_DIR/bin/mpif77 | |
| export OMP_NUM_THREADS=1 | |
| export PETSC_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/petsc | |
| export C_INCLUDE_PATH=$mpi/include:$C_INCLUDE_PATH | |
| export CPLUS_INCLUDE_PATH=$mpi/include:$CPLUS_INCLUDE_PATH | |
| export FPATH=$mpi/include:$FPATH | |
| export MANPATH=$mpi/share/man:$MANPATH | |
| export LD_LIBRARY_PATH=$mpi/lib:$LD_LIBRARY_PATH | |
| python3 scripts/AutoTest.py -n 2 | |
| - name: run step2-2d in parallel | |
| run: | | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/examples/tutorial | |
| ls | |
| export MPI_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi | |
| export PATH=$PATH:$MPI_DIR/bin | |
| export CC=$MPI_DIR/bin/mpicc | |
| export CXX=$MPI_DIR/bin/mpicxx | |
| export F90=$MPI_DIR/bin/mpif90 | |
| export F77=$MPI_DIR/bin/mpif77 | |
| export OMP_NUM_THREADS=1 | |
| export PETSC_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/petsc | |
| export C_INCLUDE_PATH=$mpi/include:$C_INCLUDE_PATH | |
| export CPLUS_INCLUDE_PATH=$mpi/include:$CPLUS_INCLUDE_PATH | |
| export FPATH=$mpi/include:$FPATH | |
| export MANPATH=$mpi/share/man:$MANPATH | |
| export LD_LIBRARY_PATH=$mpi/lib:$LD_LIBRARY_PATH | |
| mpirun -np 2 /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/bin/asfem -i step2-2d.json | |
| - name: run step2-3d in parallel | |
| run: | | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/examples/tutorial | |
| ls | |
| export MPI_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi | |
| export PATH=$PATH:$MPI_DIR/bin | |
| export CC=$MPI_DIR/bin/mpicc | |
| export CXX=$MPI_DIR/bin/mpicxx | |
| export F90=$MPI_DIR/bin/mpif90 | |
| export F77=$MPI_DIR/bin/mpif77 | |
| export OMP_NUM_THREADS=1 | |
| export PETSC_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/petsc | |
| export C_INCLUDE_PATH=$mpi/include:$C_INCLUDE_PATH | |
| export CPLUS_INCLUDE_PATH=$mpi/include:$CPLUS_INCLUDE_PATH | |
| export FPATH=$mpi/include:$FPATH | |
| export MANPATH=$mpi/share/man:$MANPATH | |
| export LD_LIBRARY_PATH=$mpi/lib:$LD_LIBRARY_PATH | |
| mpirun -np 2 /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/bin/asfem -i step2-3d.json | |
| - name: run step3-2d in parallel | |
| run: | | |
| cd /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/examples/tutorial | |
| export MPI_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/openmpi | |
| export PATH=$PATH:$MPI_DIR/bin | |
| export OMP_NUM_THREADS=1 | |
| export PETSC_DIR=/home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/AsFemLibs/petsc | |
| export C_INCLUDE_PATH=$mpi/include:$C_INCLUDE_PATH | |
| export CPLUS_INCLUDE_PATH=$mpi/include:$CPLUS_INCLUDE_PATH | |
| export FPATH=$mpi/include:$FPATH | |
| export MANPATH=$mpi/share/man:$MANPATH | |
| export LD_LIBRARY_PATH=$mpi/lib:$LD_LIBRARY_PATH | |
| mpirun -np 2 /home/runner/work/${{github.event.repository.name}}/${{github.event.repository.name}}/bin/asfem -i step3-2d.json | |
| - name: clean all folders and files | |
| run: | | |
| rm -rf temp | |
| rm -rf AsFemLibs | |
| python3 scripts/Clean.py | |
| ls -l | |
| echo "*********************************************************************" | |
| echo "*** All the files are clean !" | |
| echo "*********************************************************************" |