.Rmd files in /Rscripts can be run to generate the figures and data in their respective files.

Note that all the .Rmd files expect the root dir to be set to the path currently inhabited by this readme, 
and /figures and /data should exist inside this path. 

Info on R/package versions:

> sessionInfo()
R version 4.1.0 (2021-05-18)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 17763)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] parallel  stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] gganimate_1.0.7   egg_0.4.5         gridExtra_2.3     stringr_1.4.0     ggpubr_0.4.0     
 [6] R.utils_2.10.1    R.oo_1.24.0       R.methodsS3_1.8.1 pbapply_1.5-0     deSolve_1.29     
[11] ggplot2_3.3.5    

loaded via a namespace (and not attached):
 [1] progress_1.2.2    tidyselect_1.1.1  xfun_0.25         reshape2_1.4.4    purrr_0.3.4      
 [6] carData_3.0-4     colorspace_2.0-2  vctrs_0.3.8       generics_0.1.0    viridisLite_0.4.0
[11] htmltools_0.5.2   yaml_2.2.1        utf8_1.2.2        rlang_0.4.11      pillar_1.6.2     
[16] glue_1.4.2        withr_2.4.2       DBI_1.1.1         tweenr_1.0.2      lifecycle_1.0.0  
[21] plyr_1.8.6        munsell_0.5.0     ggsignif_0.6.3    gtable_0.3.0      evaluate_0.14    
[26] labeling_0.4.2    knitr_1.33        fastmap_1.1.0     gifski_1.4.3-1    fansi_0.5.0      
[31] broom_0.7.9       Rcpp_1.0.7        backports_1.2.1   scales_1.1.1      abind_1.4-5      
[36] farver_2.1.0      hms_1.1.0         digest_0.6.27     stringi_1.7.3     rstatix_0.7.0    
[41] dplyr_1.0.7       grid_4.1.0        cowplot_1.1.1     tools_4.1.0       magrittr_2.0.1   
[46] tibble_3.1.3      car_3.0-12        tidyr_1.1.3       crayon_1.4.1      pkgconfig_2.0.3  
[51] ellipsis_0.3.2    prettyunits_1.1.1 assertthat_0.2.1  rmarkdown_2.10    R6_2.5.0         
[56] compiler_4.1.0