-
Notifications
You must be signed in to change notification settings - Fork 9
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
chore: turn off getphylo as it is still in experimental phase
- Loading branch information
1 parent
5b02478
commit 3a78df6
Showing
2 changed files
with
1 addition
and
4 deletions.
There are no files selected for viewing
3 changes: 0 additions & 3 deletions
3
.examples/lanthipeptide_lactobacillus/df_regions_antismash_7.1.0.csv
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,8 +1,5 @@ | ||
bgc_id,genome_id,region,accession,start_pos,end_pos,contig_edge,product,region_length,most_similar_known_cluster_id,most_similar_known_cluster_description,most_similar_known_cluster_type,similarity,source,gbk_path | ||
CR954253.1.region001,GCA_000056065.1,1.1,CR954253.1,17407,39909,False,['lanthipeptide-class-iii'],22502,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000056065.1/CR954253.1.region001.gbk | ||
CR954253.1.region002,GCA_000056065.1,1.2,CR954253.1,125153,136119,False,['RiPP-like'],10966,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000056065.1/CR954253.1.region002.gbk | ||
CR954253.1.region003,GCA_000056065.1,1.3,CR954253.1,1745672,1767868,False,['lanthipeptide-class-iv'],22196,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000056065.1/CR954253.1.region003.gbk | ||
CP000156.1.region001,GCA_000191165.1,1.1,CP000156.1,117260,128451,False,['RiPP-like'],11191,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000191165.1/CP000156.1.region001.gbk | ||
CP000156.1.region002,GCA_000191165.1,1.2,CP000156.1,1767251,1789447,False,['lanthipeptide-class-iv'],22196,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000191165.1/CP000156.1.region002.gbk | ||
CP000412.1.region001,GCA_000014405.1,1.1,CP000412.1,17283,39785,False,['lanthipeptide-class-iii'],22502,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000014405.1/CP000412.1.region001.gbk | ||
CP000412.1.region002,GCA_000014405.1,1.2,CP000412.1,120275,131241,False,['RiPP-like'],10966,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000014405.1/CP000412.1.region002.gbk |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -10,4 +10,4 @@ rules: | |
clinker: TRUE | ||
interproscan: FALSE | ||
mmseqs2: TRUE | ||
getphylo: TRUE | ||
getphylo: FALSE |