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chore: turn off getphylo as it is still in experimental phase
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matinnuhamunada committed Apr 17, 2024
1 parent 5b02478 commit 3a78df6
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Showing 2 changed files with 1 addition and 4 deletions.
Original file line number Diff line number Diff line change
@@ -1,8 +1,5 @@
bgc_id,genome_id,region,accession,start_pos,end_pos,contig_edge,product,region_length,most_similar_known_cluster_id,most_similar_known_cluster_description,most_similar_known_cluster_type,similarity,source,gbk_path
CR954253.1.region001,GCA_000056065.1,1.1,CR954253.1,17407,39909,False,['lanthipeptide-class-iii'],22502,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000056065.1/CR954253.1.region001.gbk
CR954253.1.region002,GCA_000056065.1,1.2,CR954253.1,125153,136119,False,['RiPP-like'],10966,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000056065.1/CR954253.1.region002.gbk
CR954253.1.region003,GCA_000056065.1,1.3,CR954253.1,1745672,1767868,False,['lanthipeptide-class-iv'],22196,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000056065.1/CR954253.1.region003.gbk
CP000156.1.region001,GCA_000191165.1,1.1,CP000156.1,117260,128451,False,['RiPP-like'],11191,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000191165.1/CP000156.1.region001.gbk
CP000156.1.region002,GCA_000191165.1,1.2,CP000156.1,1767251,1789447,False,['lanthipeptide-class-iv'],22196,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000191165.1/CP000156.1.region002.gbk
CP000412.1.region001,GCA_000014405.1,1.1,CP000412.1,17283,39785,False,['lanthipeptide-class-iii'],22502,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000014405.1/CP000412.1.region001.gbk
CP000412.1.region002,GCA_000014405.1,1.2,CP000412.1,120275,131241,False,['RiPP-like'],10966,,,,,bgcflow,data/interim/antismash/7.1.0/GCA_000014405.1/CP000412.1.region002.gbk
2 changes: 1 addition & 1 deletion .examples/lanthipeptide_lactobacillus/project_config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -10,4 +10,4 @@ rules:
clinker: TRUE
interproscan: FALSE
mmseqs2: TRUE
getphylo: TRUE
getphylo: FALSE

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