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Biodomains semicolon update #124

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wants to merge 7 commits into from
Closed

Biodomains semicolon update #124

wants to merge 7 commits into from

Commits on Feb 17, 2024

  1. Modified genes_biodomains transform to handle semicolon-separated Ens… 

    …embl IDs, and edited the tests to test that case
    @jaclynbeck-sage
    jaclynbeck-sage committed Feb 17, 2024
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Commits on Feb 21, 2024

  1. Moved split_ensembl_ids function from biodomains transform to utils f… 

    …ile, made it more generic, updated its test, plus sonarcloud delinting
    @jaclynbeck-sage
    jaclynbeck-sage committed Feb 21, 2024
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  2. Updated gene annotation pre-processing to handle new biodomains file,… 

    … bumped version of gene_table_merged to the new file
    @jaclynbeck-sage
    jaclynbeck-sage committed Feb 21, 2024
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  3. Moved biodomain split operation before grouping operation in gene_inf… 

    …o transform
    @jaclynbeck-sage
    jaclynbeck-sage committed Feb 21, 2024
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  4. Added clarification to the docstring for the new util function

    @jaclynbeck-sage
    jaclynbeck-sage committed Feb 21, 2024
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  5. Added test for null values for the split delimited function

    @jaclynbeck-sage
    jaclynbeck-sage committed Feb 21, 2024
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  6. Changed resource url variables to uppercase to indicate constants

    @jaclynbeck-sage
    jaclynbeck-sage committed Feb 21, 2024
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