build(deps): bump conda-incubator/setup-miniconda from 3.0.3 to 3.0.4… #30
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| name: Build | |
| on: | |
| push: | |
| branches: [main] | |
| tags: | |
| - v* | |
| # Required shell entrypoint to have properly activated conda environments | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| jobs: | |
| check: | |
| name: Run checks for periodicity-detection on ubuntu with python 3.7 | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3.0.4 | |
| with: | |
| use-mamba: true | |
| auto-update-conda: true | |
| python-version: "3.7" | |
| - name: Install dependencies | |
| run: | | |
| pip install -r requirements.dev | |
| - name: Typcheck with mypy | |
| run: | | |
| python setup.py typecheck | |
| - name: Lint with flake8 | |
| run: | | |
| flake8 . --count --show-source --statistics | |
| test: | |
| name: Test periodicity-detection on ${{ matrix.os }} with python ${{ matrix.python_version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| max-parallel: 3 | |
| matrix: | |
| os: [ubuntu-latest] # [ubuntu-latest, windows-latest, macOS-latest] | |
| python_version: ["3.7", "3.8", "3.9", "3.10", "3.11"] | |
| fail-fast: false | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3.0.4 | |
| with: | |
| use-mamba: true | |
| auto-update-conda: true | |
| python-version: ${{ matrix.python_version }} | |
| - name: Install dependencies | |
| run: | | |
| pip install -r requirements.dev | |
| - name: Test with pytest | |
| run: | | |
| python setup.py test | |
| - name: Extract test coverage | |
| if: ${{ matrix.python_version == '3.11' && matrix.os == 'ubuntu-latest' }} | |
| run: | | |
| SUMMARY=$(sed -n "s/^<coverage.*line-rate=\"\([0-9.]*\)\".*>$/\1/p" coverage.xml) | |
| echo "COVERAGE=$(echo ${SUMMARY})" >> $GITHUB_ENV | |
| echo "Extracted coverage data: ${COVERAGE}" | |
| REF=${{ github.ref }} | |
| IFS='/' read -ra PATHS <<< "$REF" | |
| BRANCH_NAME="${PATHS[1]}_${PATHS[2]}" | |
| echo "BRANCH=$(echo ${BRANCH_NAME})" >> $GITHUB_ENV | |
| echo "Extracted branch name: $BRANCH_NAME" | |
| - name: Create coverage badge | |
| if: ${{ matrix.python_version == '3.11' && matrix.os == 'ubuntu-latest' }} | |
| uses: schneegans/dynamic-badges-action@v1.7.0 | |
| with: | |
| auth: ${{ secrets.GIST_SECRET }} | |
| gistID: 6762bee806477c52e079f21d2f252688 | |
| filename: periodicity_detection__${{ env.BRANCH }}.json | |
| label: Test Coverage | |
| message: ${{ env.COVERAGE }} | |
| color: green | |
| namedLogo: pytest | |
| - name: Upload Coverage to Codecov | |
| if: ${{ matrix.python_version == '3.11' && matrix.os == 'ubuntu-latest' }} | |
| uses: codecov/codecov-action@v4 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| with: | |
| files: coverage.xml | |
| flags: unittests | |
| build-source-distribution: | |
| name: Build source distribution | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') | |
| needs: | |
| - test | |
| - check | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3.0.4 | |
| with: | |
| use-mamba: true | |
| auto-update-conda: true | |
| python-version: 3.7 | |
| - name: Build source distribution | |
| run: | | |
| python setup.py sdist | |
| - name: Upload packages | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: packages-source | |
| path: dist | |
| build-manylinux-wheels: | |
| name: Build manylinux wheels | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') | |
| needs: | |
| - test | |
| - check | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build manylinux Python wheels | |
| uses: RalfG/python-wheels-manylinux-build@v0.7.1-manylinux2014_x86_64 | |
| with: | |
| # our wheel is purely python, so this creates a *-none-any.wheel and other versions are not required for now | |
| python-versions: 'cp37-cp37m' | |
| - name: List packages | |
| run: | | |
| ls -alh dist | |
| - name: Upload packages | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: packages-manylinux | |
| path: dist/*.whl | |
| publish: | |
| name: Publish distributions | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') | |
| needs: [build-source-distribution, build-manylinux-wheels] | |
| runs-on: ubuntu-latest | |
| environment: release | |
| permissions: | |
| # IMPORTANT: this permission is mandatory for trusted publishing | |
| id-token: write | |
| steps: | |
| - name: Download packages | |
| uses: actions/download-artifact@v4 | |
| with: | |
| path: dist | |
| - name: Restore original folder structure of dist | |
| run: | | |
| find dist -type f -exec mv {} dist/ \; | |
| find dist/* -type d -exec rmdir {} \; || true | |
| - name: Publish package to PyPI | |
| uses: pypa/gh-action-pypi-publish@v1.8.14 |