Babel v0.9

What's Changed

• Add complex portal by @Shalsh23 in #53
• Paginate UberGraph results and remove EFO by @gaurav in #49
• Save intermediate files into babel_outputs by @gaurav in #57
• Add macromolecular complex compendium by @Shalsh23 in #55
• Improve kegg requests by @jdr0887 in #64
• Add UMLS IDs to taxon by @gaurav in #60
• Improve UMLS coverage by @gaurav in #50
• Fix misplaced continue by @gaurav in #80
• Fix CHEBI:CHEBI: bug (#69) by @gaurav in #78
• Added relation from UMLS/synonyms into synonyms/umls.txt by @gaurav in #92
• Split cliques that contain both MolecularMixtures and SmallMolecules by @gaurav in #91
• Fix ChemicalEntity identifier prefix order bug by @gaurav in #94
• Improve Dockerfile by @gaurav in #74
• Treat ENSEMBL versioned identifier as identical to their non-versioned representation by @gaurav in #79
• Added a filter for numerical values in UMLS synonyms by @gaurav in #95
• Fix bug in HMDB metabolites with a single synonym by @gaurav in #104
• Replaced UberGraph's closure graph with the redundant graph by @gaurav in #118
• Fix UniChem by @gaurav in #108
• Replace MacromolecularComplexMixin with MacromolecularComplex by @gaurav in #117
• Returned EFO identifiers to disease/phenotypes by @cbizon in #120
• change syn file format by @cbizon in #113
• Fix capitalization bug in SynonymFactory by @gaurav in #130
• Make synonym outputs explicit inputs to other rules in Snakemake by @gaurav in #124
• Add a GitHub Action to generate Docker images from this repo for all releases by @gaurav in #106
• Move UNII out of private and back into Downloads by @gaurav in #96

New Contributors

• @Shalsh23 made their first contribution in #53
• @jdr0887 made their first contribution in #64

Full Changelog: 2022sep13...v0.9