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@TravisWheelerLab

Wheeler Lab

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  1. nail nail Public

    Nail is an Alignment Inference tooL

    Rust 41 2

  2. BATH BATH Public

    Better Alignments with Translated HMMER

    C 15 3

  3. AvxWindowFmIndex AvxWindowFmIndex Public

    A fast, AVX2 and ARM Neon accelerated FM index library

    C 31 5

  4. ULTRA ULTRA Public

    ULTRA Locates Tandemly Repetitive Areas

    C++ 24 4

  5. DIPLOMAT DIPLOMAT Public

    Deep learning-based Identity Preserving Labeled-Object Multi-Animal Tracking (Beta)

    Python 7 2

  6. NEAR NEAR Public

    Makefile 2

Repositories

Showing 10 of 59 repositories
  • ULTRA-paper Public
    TravisWheelerLab/ULTRA-paper’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 15, 2024
  • sufr Public

    Parallel Construction of Suffix Arrays in Rust

    TravisWheelerLab/sufr’s past year of commit activity
    Rust 9 BSD-3-Clause 0 0 0 Updated Nov 15, 2024
  • geomxrename Public

    Rename files for use by GeoMX NGS Pipeline app on BaseSpace (Illumina)

    TravisWheelerLab/geomxrename’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 13, 2024
  • DIPLOMAT Public

    Deep learning-based Identity Preserving Labeled-Object Multi-Animal Tracking (Beta)

    TravisWheelerLab/DIPLOMAT’s past year of commit activity
    Python 7 BSD-3-Clause 2 3 0 Updated Nov 7, 2024
  • BATH Public

    Better Alignments with Translated HMMER

    TravisWheelerLab/BATH’s past year of commit activity
    C 15 3 0 1 Updated Oct 30, 2024
  • nail Public

    Nail is an Alignment Inference tooL

    TravisWheelerLab/nail’s past year of commit activity
    Rust 41 BSD-3-Clause 2 0 0 Updated Oct 30, 2024
  • strobemers Public

    Strobemers in Rust

    TravisWheelerLab/strobemers’s past year of commit activity
    Rust 1 BSD-3-Clause 0 0 0 Updated Oct 26, 2024
  • nail-benchmarks Public

    A collection of reproducible benchmarks for nail

    TravisWheelerLab/nail-benchmarks’s past year of commit activity
    Python 0 0 0 0 Updated Sep 27, 2024
  • ULTRA Public

    ULTRA Locates Tandemly Repetitive Areas

    TravisWheelerLab/ULTRA’s past year of commit activity
    C++ 24 BSD-3-Clause 4 1 0 Updated Sep 13, 2024
  • aurora Public
    TravisWheelerLab/aurora’s past year of commit activity
    Rust 2 BSD-3-Clause 0 0 0 Updated Sep 11, 2024
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