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added ch_bams
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erinyoung committed Apr 24, 2024
1 parent a49ba20 commit 7a742fa
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1 change: 1 addition & 0 deletions subworkflows/quality_assessment.nf
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Expand Up @@ -97,6 +97,7 @@ workflow quality_assessment {
.set { for_versions }

emit:
bams = ch_bams
for_summary = for_summary.collect()
for_multiqc = for_multiqc.mix(quast.out.for_multiqc).collect()
versions = for_versions
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