fix linear output of grouped counts, fixes #258, huge thanks to @qson…

…ehara
ablab · Nov 15, 2024 · 3ad676c · 3ad676c
1 parent 099bdc8
commit 3ad676c
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/long_read_counter.py b/src/long_read_counter.py
@@ -247,7 +247,7 @@ def __init__(self, output_prefix, assignment_extractor, read_groups, read_counte
             self.group_numeric_ids = {}
             self.ordered_groups = sorted(read_groups)
             if self.ordered_groups:
-                for i, g in enumerate(read_groups):
+                for i, g in enumerate(self.ordered_groups):
                     self.group_numeric_ids[g] = i
         self.read_counter = read_counter