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lpantano authored Aug 16, 2024
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Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your inputs and analysis parameters. This input drives a parallel run that handles distributed execution, idempotent processing restarts and safe transactional steps. bcbio provides a shared community resource that handles the data processing component of sequencing analysis, providing researchers with more time to focus on the downstream biology.

**NOTE!!!! Please read the notice of [discontinuation of this project](https://github.com/bcbio/bcbio-nextgen/issues/3749) - 08-16-2024**

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[![Build Status](https://travis-ci.org/bcbio/bcbio-nextgen.svg?branch=master)](https://travis-ci.org/bcbio/bcbio-nextgen)
[![Documentation status](https://readthedocs.org/projects/bcbio-nextgen/badge/?version=latest)](https://bcbio-nextgen.readthedocs.io/en/latest/?badge=latest)
[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.3564938.svg)](https://doi.org/10.5281/zenodo.3564938)
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