Merge branch 'main' into 3-add-ruff-linter

.github/CODEOWNERS

@@ -1 +1 @@
-* @reece
+* @biocommons/maintainers

.github/labels.yml

@@ -1,39 +1,3 @@
-- name: "bug"
-  color: "d73a4a"
-  description: "Something isn't working"
+# file must contain an array, which may be empty
 
-- name: "documentation"
-  color: "0075ca"
-  description: "Improvements or additions to documentation"
-
-- name: "duplicate"
-  color: "cfd3d7"
-  description: "This issue or pull request already exists"
-
-- name: "enhancement"
-  color: "a2eeef"
-  description: "New feature or request"
-
-- name: "good first issue"
-  color: "7057ff"
-  description: "Good for newcomers"
-
-- name: "help wanted"
-  color: "008672"
-  description: "Extra attention is needed"
-
-- name: "invalid"
-  color: "e4e669"
-  description: "This doesn't seem right"
-
-- name: "question"
-  color: "d876e3"
-  description: "Further information is requested"
-
-- name: "rfc"
-  color: "d876e3"
-  description: "Request for comments"
-
-- name: "wontfix"
-  color: "ffffff"
-  description: "This will not be worked on"
+[]

.github/workflows/labels.yml

@@ -1,26 +1,29 @@
-name: github
-
+name: Sync labels
 on:
+  workflow_dispatch:
   push:
     branches:
       - 'main'
     paths:
       - '.github/labels.yml'
       - '.github/workflows/labels.yml'
 
+permissions:
+  issues: write
+
 jobs:
-  labeler:
+  labels:
     runs-on: ubuntu-latest
+
     steps:
-      -
-        name: Checkout
-        uses: actions/checkout@v3
-      -
-        name: Run Labeler
-        uses: crazy-max/ghaction-github-labeler@v4
+      - uses: actions/checkout@v4
         with:
-          github-token: ${{ secrets.GITHUB_TOKEN }}
-          yaml-file: .github/labels.yml
-          exclude: |
-            help*
-            *issue
+          sparse-checkout: .github/labels.yml
+
+      - uses: EndBug/label-sync@v2
+        with:
+          config-file: |
+            https://raw.githubusercontent.com/biocommons/.github/main/etc/labels.yml
+            .github/labels.yml
+
+          delete-other-labels: false

.github/workflows/python-package.yml

@@ -2,6 +2,8 @@ name: Python package
 
 on:
   push:
+    tags:
+      - '[0-9]+.[0-9]+.[0-9]+'
   pull_request:
 
 jobs:

.github/workflows/stale.yml

@@ -2,23 +2,10 @@
 
 name: 'Close stale issues and PRs'
 on:
+  workflow_dispatch:
   schedule:
     - cron: '1 1 * * *'
 
 jobs:
   stale:
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/stale@v8
-        with:
-          days-before-issue-stale: 30
-          days-before-issue-close: 7
-          stale-issue-message: 'This issue is stale because it has been open 30 days with no activity. Remove stale label or comment or this will be closed in 7 days.'
-          close-issue-message: 'This issue was closed because it has been stalled for 7 days with no activity.'
-
-          days-before-pr-stale: 30
-          days-before-pr-close: 7
-          stale-pr-message: 'This PR is stale because it has been open 30 days with no activity. Remove stale label or comment or this will be closed in 7 days.'
-          close-pr-message: 'This PR was closed because it has been stalled for 7 days with no activity.'
-
-          exempt-all-pr-assignees: true
+    uses: biocommons/.github/.github/workflows/stale.yml@main