A genome-scale metabolic model of Saccharomyces cerevisiae that integrates expression constraints and reaction thermodynamics
Preprint on BioRxiv
This code is an early release. You will need pyTFA and ETFL to run it. We recommend using commercial solvers such as CPLEX or Gurobi to run these problems.
For further details, see ETFL's instruction.
To run the scripts, the data that is deposited in Zenodo is needed.