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Happy hacking
💭
Happy hacking
72 followers · 150 following

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault Contributor

Organizations

@parisepigenetics

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cbouyio/README.md
  • 👋 Hi, I’m @cbouyio or Costas Bouyioukos an assistant professor of bioinformatics at the University of Paris (Université Paris Cité)
  • 👀 I’m interested in bioinformatics, computational and systems biology, multi-omics and regulatory analysis and Machine/Deep learning applications to biology
  • 👀 I manage the @parispeigenetics (https://github.com/parisepigenetics) GitHub organisation for research projects in the department of epigenetics and the @UParisCit-bioinfo (https://github.com/ParisDiderot-Bioinfo) for my teaching
  • 🌱 I’m currently learning, deepML models architecture for multi-omics analyses problems
  • 💞️ I’m looking to collaborate on, computational methods for metagenomics and single cell analyses as well as 3-dimensional data representation and visualisation
  • 💞️ I'm always particularly interested in complex biological networks modelling and reconstriction
  • 📫 How to reach me: cbouyio@gmail.com personal email, costas.bouyioukos@u-paris.fr professional email

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  1. parisepigenetics/great_3d parisepigenetics/great_3d Public

    A tool for the analysis and visualisation of 3d genome structure, epigenetics and gene expression.

    Python 4 2

  2. parisepigenetics/riboproanalysis parisepigenetics/riboproanalysis Public

    A comprehensive, best practices, pipeline for Ribo-seq experiments data analysis

    Shell 2 1

  3. parisepigenetics/rna_feat_ext parisepigenetics/rna_feat_ext Public

    Software tools to extract mRNA's features from a list of ENSEMBL gene IDs.

    Python 2 1

  4. parisepigenetics/pyna-colada parisepigenetics/pyna-colada Public

    Pina colada is a python application using 'straw' and 'juice-tools' to provide an more useful API to work with .hic Hi-C experiments files.

    Python

  5. shiny-your-gene-list shiny-your-gene-list Public

    An R-shiny interactive application to explore and valorise gene sets and lists from high throughput genomics experiments.

    R 1

  6. DU-Bii/module-6-Integrative-Bioinformatics DU-Bii/module-6-Integrative-Bioinformatics Public

    Integrative bioinformatics course of the Diplôme Universitaire en Bioinformatique Integrative (DU-Bii)

    HTML 8 6