This is a Certe R Package with functions to automate department projects using MS Teams, MS Planner, Shiny, R Markdown and Quarto. This package is part of the 'certedata' universe.
You can read the manual with explanation about its functions here.
These are R packages developed by Certe, a non-profit organisation for integrated medical diagnostics and advice for primary and secondary healthcare. Certe provides high-quality medical diagnostics and related products and services for healthcare providers and their patients. Hospitals, (general) practitioners, midwives and thus hundreds of thousands of people have relied on Certe's care for many years.
Their department of Medical Epidemiology, which developed these R packages, conducts (and develops new methods for) medical data analyses, for both routine workflows and scientific research. For all our packages, please visit our GitHub organisation overview. Our R packages are not on CRAN since their use is primarily intended for own staff, but they are publicly available to support open science.
All our R packages are published here at R-universe, allowing anyone to install and update the packages using common methods, such as the RStudio menu bar or install.packages(). To add the Certe Medical Epidemiology R-universe to your existing repositories, run:
options(repos = c(
CerteMedEpi = "https://certe-medical-epidemiology.r-universe.dev",
options()$repos)You can now install any Certe R package, e.g.:
# our 'loader package' certedata installs all Certe R packages this way:
install.packages("certedata", dependencies = TRUE)
# or install a specific package:
install.packages("certegis")
install.packages("certeplot2")
install.packages("certestats")| Certe R Package | Latest release | Daily tests | Code coverage | Code compliance | Changelog |
|---|---|---|---|---|---|
certeapi |
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certedata |
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certedb |
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certegis |
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certemail |
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certeplot2 |
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certeprojects |
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certestats |
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certestyle |
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certetoolbox |
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We believe open science matters, which is why these R packages are publicly available on GitHub.
They are free, open-source software and are all licensed under the GNU General Public License v2.0 (GPL-2). In a nutshell, this means that our R packages:
- May be used for commercial purposes
- May be used for private purposes
- May not be used for patent purposes
- May be modified, although:
- Modifications must be released under the same license when distributing the package
- Changes made to the code must be documented
- May be distributed, although:
- Source code must be made available when the package is distributed
- A copy of the license and copyright notice must be included with the package.
- Come with a LIMITATION of liability
- Come with NO warranty
© Certe Medical Diagnostics & Advice Foundation - www.certe.nl. Certe is the sole copyright holder and funder of this software.