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Update README.md
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Colin J. Carlson authored Feb 2, 2022
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# Malaria and geoengineering forecasts
Codebase accompanies: Carlson _et al._ (2022) "Solar geoengineering could redistribute malaria risk in developing countries." _Nature Communications_, accepted in principle.
Codebase accompanies: Carlson _et al._ (2022) "Solar geoengineering could redistribute malaria risk in developing countries." _Nature Communications_, in press.

# Raw files

There are several components for the pipeline (below) in the Raw folder; larger climate files are stored elsewhere[...add...]
There are several components for the pipeline (below) in the Raw folder; 250GB of larger climate files are stored at a Dryad repository.

```
Raw
|
├─Populations
| └ (...) # A folder of .nc files: population projections in decade slices for SSP 2 and SSP5
|
├─## These are falciparum / vivax prevalence files that go into Figures S9-S11
├─2020_GBD2019_Global_PfPR_2000.tif
├─2020_GBD2019_Global_PfPR_2019.tif
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├─## These are the raw Bayesian thermal response curves used to generate the R0 maps
├─map_Angambiae_Pfalc_08_12_20.csv
├─map_Angambiae_Pvivax_08_12_20.csv
├─map_Anstephensi_Pvivax_08_12_20.csv
|
├─Populations
| └ (...) # A folder of .nc files: population projections in decade slices for SSP 2 and SSP5
|
└─map_Anstephensi_Pvivax_08_12_20.csv
```

# Directory of Code
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