[FIX] fix octave create roi #8
Workflow file for this run
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--- | |
name: tests and coverage with octave | |
env: | |
OCTFLAGS: --no-gui --no-window-system --silent | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: ['*'] | |
schedule: | |
- cron: 0 0 1 * * | |
# Allows you to run this workflow manually from the Actions tab | |
workflow_dispatch: | |
jobs: | |
tests_octave: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Install CPP_ROI | |
uses: actions/checkout@v4 | |
with: | |
submodules: true | |
fetch-depth: 0 | |
- name: Install SPM | |
run: | | |
git clone https://github.com/spm/spm12.git --depth 1 | |
- name: Install Moxunit and MOcov | |
run: | | |
git clone https://github.com/MOxUnit/MOxUnit.git --depth 1 | |
git clone https://github.com/MOcov/MOcov.git --depth 1 | |
- name: Install octave | |
run: | | |
sudo apt-get -y -qq update | |
sudo apt-get -y install \ | |
octave \ | |
liboctave-dev\ | |
octave-common \ | |
octave-io \ | |
octave-image \ | |
octave-signal \ | |
octave-statistics | |
make -C MOxUnit install | |
make -C MOcov install | |
- name: Compile SPM | |
run: | | |
make -C spm12/src PLATFORM=octave distclean | |
make -C spm12/src PLATFORM=octave | |
make -C spm12/src PLATFORM=octave install | |
octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'spm12')); savepath();" | |
- name: Add bids-matlab | |
run: make install_dev | |
- name: Run tests | |
run: | | |
octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'tests', 'utils')); savepath();" | |
octave $OCTFLAGS --eval "cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows')); run tests_octave;" | |
- name: Code coverage | |
uses: codecov/codecov-action@v4 | |
with: | |
file: coverage.xml | |
flags: octave | |
name: codecov-umbrella | |
fail_ci_if_error: false |