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eXascaleInfolab/graph_embedding_hyperparam_analysis
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This is the implementation used in our paper of graph embedding hyperparameter analysis. Dingqi Yang, Bingqing Qu, Rana Hussein, Paolo Rosso, Philippe Cudre-Mauroux, and Jie Liu, Revisiting Embedding Based Graph Analyses: Hyperparameters Matter! IEEE Transactions on Knowledge and Data Engineering (TKDE), 2023. It contains two types of algorithms: - Factorization-based graph embedding techniques - Random-walk graph-sampling based techniques How to use (Tested on MATLAB 2017a and 2017b): - embMF: 1. run experiment_MF.m - embRWGS: 1. Compile embRWGS.c using mex: mex embRWGS.c 2. Run experiment_RWGS.m - evaluation on the node classification task (using Deepwalk testing code): 1. run evaluation_node_classification.m or from command line: 1. python ./scoring.py ./blogcatalog.mat ./embeddings_MF.mat ./classification_res_MF.mat Please cite our paper if you publish material using this code.
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