Move Empirical into phylotrackpy directory

emilydolson · Jul 9, 2024 · f089af0 · f089af0
1 parent 046ff13
commit f089af0
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Showing 4 changed files with 3 additions and 3 deletions.
diff --git a/.gitmodules b/.gitmodules
@@ -1,4 +1,4 @@
 [submodule "Empirical"]
-	path = Empirical
+	path = phylotrackpy/Empirical
 	url = https://github.com/devosoft/Empirical.git
 	branch = mabe-systematics
diff --git a/Empirical → phylotrackpy/Empirical b/Empirical → phylotrackpy/Empirical
diff --git a/systematics_bindings.cpp → phylotrackpy/systematics_bindings.cpp b/systematics_bindings.cpp → phylotrackpy/systematics_bindings.cpp
diff --git a/setup.py b/setup.py
@@ -19,7 +19,7 @@
 
 ext_modules = [
     Pybind11Extension("phylotrackpy.systematics",
-        ["systematics_bindings.cpp"],
+        ["phylotrackpy/systematics_bindings.cpp"],
         # Example: passing in the version to the compiled code
         define_macros = [('VERSION_INFO', __version__), ("EMP_OPTIONAL_THROW_ON", 1)],
         cxx_std=20
@@ -41,5 +41,5 @@
     zip_safe=False,
     python_requires=">=3.7",
     packages=['phylotrackpy'],
-    headers=sorted(glob.glob("Empirical/**/*.hpp", recursive=True))
+    headers=sorted(glob.glob("phylotrackpy/Empirical/**/*.hpp", recursive=True))
 )