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Update estimate_infections.stan
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seabbs authored Aug 20, 2024
1 parent 0c21ddc commit 07734bd
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2 changes: 1 addition & 1 deletion inst/stan/estimate_infections.stan
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Expand Up @@ -51,7 +51,7 @@ parameters{
array[estimate_r] real initial_infections ; // seed infections
array[estimate_r && seeding_time > 1 ? 1 : 0] real initial_growth; // seed growth rate
array[bp_n > 0 ? 1 : 0] real<lower = 0> bp_sd; // standard deviation of breakpoint effect
array[bp_n] real<multiplier = bp_sd[bp_n > 0 ? 1 : 0]> bp_effects; // Rt breakpoint effects
array[bp_n] real<multiplier = bp_sd> bp_effects; // Rt breakpoint effects
// observation model

vector<lower = delay_params_lower>[delay_params_length] delay_params; // delay parameters
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