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  1. bubble_gun bubble_gun Public

    Python 40 2

  2. gfa_subgraphs gfa_subgraphs Public

    Extracts subgraphs or components from a graph in GFA format

    Python 23

  3. PanPA PanPA Public

    PanPA is a tool for building panproteome graphs and aligning sequences back to the graphs.

    Python 12

  4. extgfa extgfa Public

    External GFA (on disk) representation of GFA files (proof of concept)

    Python 7

  5. smith_waterman_cython smith_waterman_cython Public

    A test implementation of Smith Waterman algorithm with Cython

    Python 2

  6. bernatgel/karyoploteR bernatgel/karyoploteR Public

    karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

    R 302 41