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24 Open 52 Closed
24 Open 52 Closed
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Issues list

Single end fastq file as input?
#83 opened Sep 6, 2024 by pc2001
about Configuration file (bulk-config.json)
#82 opened May 9, 2024 by ajcorriaosorio
Issues in SEACR_1.1.sh file
#81 opened Mar 5, 2024 by saimaniharreddy
Installation of R packages
#80 opened Feb 16, 2024 by cnyongjun
1
Picard file error
#79 opened Jan 7, 2024 by Shivani-kushwaha
meme problen：Failed to create PNG file；make_cut_matrix mistake
#78 opened Nov 13, 2023 by Zhiyi-Chen17
1
SEACR input and spike-in normalization
#77 opened Sep 8, 2023 by jordan841220
header of the produced file in bam is wrong
#75 opened Aug 2, 2023 by sunta3iouxos
space in the path brakes the script
#74 opened Jul 10, 2023 by sunta3iouxos
gff2bed: line 132: convert2bed: command not found
#73 opened Jul 5, 2023 by sunta3iouxos
ghostscript is not found
#72 opened Jul 5, 2023 by sunta3iouxos
1
has the support for cutandrun software ended?
#71 opened Jul 5, 2023 by sunta3iouxos
1
errror installing sexpdata
#70 opened Jun 29, 2023 by sunta3iouxos
A question about the +4 and -5 shifts
#69 opened Jun 27, 2023 by bio-lilin
1
TabError in validate.py
#68 opened Jun 6, 2023 by pseudacriscrucifer
3
Interpretation of the cut site probability plot from fimo analysis
#66 opened Apr 12, 2023 by HaniceSun
Syntax of the if statements on the sh scripts
#64 opened Jan 31, 2023 by ericpalto
1
other genome assembly
#63 opened Oct 22, 2022 by jamesc99
pipeline questions: control sample and rerun skipping steps
#62 opened Oct 13, 2022 by gianfilippo
updated meme release
#61 opened Oct 13, 2022 by gianfilippo
Experimental controls
#59 opened Aug 15, 2022 by brindabhatt
Couldn't run with 'frag_120: FALSE'
#38 opened Mar 15, 2022 by jamesc99
2
how to interpret the parameter "fastq_sequence_length"
#31 opened Dec 4, 2021 by fanzheng10
1
read.meme.py unable to find summery.tsv
#25 opened Sep 29, 2021 by mostafaabuzaid25
ProTip! Updated in the last three days: updated:>2024-12-16.