Merge pull request #12 from hdmf-dev/hdmf-ai #42
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| name: Run tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| workflow_dispatch: | |
| jobs: | |
| run-tests: | |
| name: ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }}-${{ matrix.name }} | |
| cancel-in-progress: true | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - { name: linux-python3.7-minimum , requirements: minimum, python-ver: "3.7" , os: ubuntu-latest } | |
| - { name: linux-python3.12 , requirements: pinned , python-ver: "3.12", os: ubuntu-latest } | |
| - { name: windows-python3.7-minimum , requirements: minimum, python-ver: "3.7" , os: windows-latest } | |
| - { name: windows-python3.12 , requirements: pinned , python-ver: "3.12", os: windows-latest } | |
| - { name: macos-python3.7-minimum , requirements: minimum, python-ver: "3.7" , os: macos-latest } | |
| - { name: macos-python3.12 , requirements: pinned , python-ver: "3.12", os: macos-latest } | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-ver }} | |
| - name: Install development/test dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install -r requirements-dev.txt | |
| - name: Install minimum dependencies | |
| if: matrix.requirements == 'minimum' | |
| run: | | |
| python -m pip install -r requirements-min.txt | |
| - name: Install pinned dependencies | |
| if: matrix.requirements == 'pinned' | |
| run: | | |
| python -m pip install -r requirements.txt | |
| - name: Install package | |
| run: | | |
| python -m pip install -e . # must install in editable mode for coverage to find sources | |
| python -m pip list | |
| - name: Run tests | |
| run: | | |
| pytest | |
| - name: Generate coverage report | |
| run: | | |
| python -m coverage xml # codecov uploader requires xml format | |
| python -m coverage report -m | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| fail_ci_if_error: true | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |