mice_uqueensland_gm

Segmentation model for mouse spinal gray matter segmentation. Created with ivadomed using data from University of Queensland 🇦🇺.

Additional context: https://forum.spinalcordmri.org/t/segmetation-centerline-errors/352

Data (internal): data.neuro.polymtl.ca:datasets/uqueensland_mouse

This model is readily available in SCT (v5.0.0 and higher) and can be used as follows:

sct_deepseg -i NIFTI_IMAGE -task seg_mice_gm

Any question? Please feel free to post on SCT forum.