Add download option to skip accession numbers #198
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| name: tests | |
| on: | |
| pull_request: # run on all pull requests | |
| push: # run only on pushes to master | |
| branches: | |
| - master | |
| schedule: # run monthly | |
| - cron: "0 0 1 * *" | |
| jobs: | |
| unit-tests: | |
| name: Unit tests | Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| include: | |
| - os: ubuntu-latest | |
| path: ~/.cache/pip | |
| - os: macos-latest | |
| path: ~/Library/Caches/pip | |
| - os: windows-latest | |
| path: ~\AppData\Local\pip\Cache | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/cache@v3 | |
| with: | |
| path: ${{ matrix.path }} | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements*.txt') }} | |
| restore-keys: ${{ runner.os }}-pip- | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| pip install -U pip setuptools wheel | |
| pip install -U tox tox-gh-actions | |
| - name: Test with tox | |
| run: tox | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| file: coverage.xml | |
| integration-tests: | |
| name: Integration tests | Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| # Run integration tests on a single OS at a time to prevent SEC rate-limiting | |
| max-parallel: 1 | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.11"] | |
| os: [ ubuntu-latest, macos-latest, windows-latest ] | |
| include: | |
| - os: ubuntu-latest | |
| path: ~/.cache/pip | |
| - os: macos-latest | |
| path: ~/Library/Caches/pip | |
| - os: windows-latest | |
| path: ~\AppData\Local\pip\Cache | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/cache@v3 | |
| with: | |
| path: ${{ matrix.path }} | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements*.txt') }} | |
| restore-keys: ${{ runner.os }}-pip- | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| pip install -U pip setuptools wheel | |
| pip install -U tox tox-gh-actions | |
| - name: Test with tox | |
| run: tox -e integration | |
| linting: | |
| name: Linting | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements*.txt') }} | |
| restore-keys: ${{ runner.os }}-pip- | |
| - uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pre-commit | |
| key: ${{ runner.os }}-pre-commit-${{ hashFiles('**/.pre-commit-config.yaml') }} | |
| restore-keys: ${{ runner.os }}-pre-commit- | |
| - name: Set up Python ${{ runner.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| - name: Install dependencies | |
| run: | | |
| pip install -U pip setuptools wheel | |
| pip install -U tox | |
| - name: Lint code | |
| run: tox -e lint -- --show-diff-on-failure | |
| - name: Lint docs | |
| run: tox -e docs |