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@biom-format @EarthMicrobiomeProject @qiime @pycogent @biocore @qiime2 @python3statement

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  1. onecodex/onecodex onecodex/onecodex Public

    Command line interface and Python client library for the One Codex API

    Python 23 12

  2. qiime2/qiime2 qiime2/qiime2 Public

    Official repository for the QIIME 2 framework.

    Python 475 241

  3. qiime2/q2cli qiime2/q2cli Public

    Command line interface for QIIME 2

    Python 19 24

  4. scikit-bio/scikit-bio scikit-bio/scikit-bio Public

    scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

    Python 896 269

  5. qiime2/Keemei qiime2/Keemei Public

    Validate tabular bioinformatics file formats in Google Sheets

    JavaScript 5 20

  6. biocore/qiime biocore/qiime Public archive

    Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.

    Python 286 265