BPROM to GFF3 converter

Uses regular expressions to extract data from the output of BPROM (a bacterial promoter prediction software tool) and converts it to the GFF3 file format.

For a converted example file, see 2022_1_23_bprom_as_gff3_AF083977.txt

Converts the following input:

To the following GFF3 output:

Run at the command line

python bprom_gff3_converter.py -f bprom_output_file_name/path.txt