Update jax.scipy.special.gamma and gammasgn to return NaN for negativ… #66362

Workflow file for this run

.github/workflows/ci-build.yaml at 6a1a3c2

	name: CI

	# We test all supported Python versions as follows:
	# - 3.10 : Documentation build
	# - 3.10 : Part of Matrix with NumPy dispatch
	# - 3.10 : Part of Matrix
	# - 3.11 : Part of Matrix

	on:
	# Trigger the workflow on push or pull request,
	# but only for the main branch
	push:
	branches:
	- main
	pull_request:
	branches:
	- main

	permissions:
	contents: read # to fetch code
	actions: write # to cancel previous workflows

	concurrency:
	group: ${{ github.workflow }}-${{ github.head_ref \|\| github.ref }}
	cancel-in-progress: true

	jobs:
	lint_and_typecheck:
	runs-on: ubuntu-latest
	timeout-minutes: 5
	steps:
	- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
	- name: Set up Python 3.11
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: 3.11
	- run: python -m pip install pre-commit
	- uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
	with:
	path: ~/.cache/pre-commit
	key: pre-commit-${{ env.pythonLocation }}-${{ hashFiles('.pre-commit-config.yaml', 'setup.py') }}
	- run: pre-commit run --show-diff-on-failure --color=always --all-files

	build:
	name: "build ${{ matrix.name-prefix }} (py ${{ matrix.python-version }} on ubuntu-20.04, x64=${{ matrix.enable-x64}})"
	runs-on: linux-x86-n2-32
	container:
	image: index.docker.io/library/ubuntu@sha256:6d8d9799fe6ab3221965efac00b4c34a2bcc102c086a58dff9e19a08b913c7ef # ratchet:ubuntu:20.04
	timeout-minutes: 60
	strategy:
	matrix:
	# Test the oldest and newest supported Python versions here.
	include:
	- name-prefix: "with 3.10"
	python-version: "3.10"
	enable-x64: 1
	prng-upgrade: 1
	num_generated_cases: 1
	- name-prefix: "with 3.13"
	python-version: "3.13"
	enable-x64: 0
	prng-upgrade: 0
	num_generated_cases: 1
	steps:
	- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
	- name: Image Setup
	run: \|
	apt update
	apt install -y libssl-dev
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: ${{ matrix.python-version }}
	- name: Get pip cache dir
	id: pip-cache
	run: \|
	python -m pip install --upgrade pip wheel
	echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
	- name: pip cache
	uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
	with:
	path: ${{ steps.pip-cache.outputs.dir }}
	key: ${{ runner.os }}-py${{ matrix.python-version }}-pip-${{ hashFiles('/setup.py', '/requirements.txt', '**/test-requirements.txt') }}
	- name: Install dependencies
	run: \|
	pip install .[minimum-jaxlib] -r build/test-requirements.txt

	- name: Run tests
	env:
	JAX_NUM_GENERATED_CASES: ${{ matrix.num_generated_cases }}
	JAX_ENABLE_X64: ${{ matrix.enable-x64 }}
	JAX_ENABLE_CUSTOM_PRNG: ${{ matrix.prng-upgrade }}
	JAX_THREEFRY_PARTITIONABLE: ${{ matrix.prng-upgrade }}
	JAX_ENABLE_CHECKS: true
	JAX_SKIP_SLOW_TESTS: true
	PY_COLORS: 1
	run: \|
	pip install -e .
	echo "JAX_NUM_GENERATED_CASES=$JAX_NUM_GENERATED_CASES"
	echo "JAX_ENABLE_X64=$JAX_ENABLE_X64"
	echo "JAX_ENABLE_CUSTOM_PRNG=$JAX_ENABLE_CUSTOM_PRNG"
	echo "JAX_THREEFRY_PARTITIONABLE=$JAX_THREEFRY_PARTITIONABLE"
	echo "JAX_ENABLE_CHECKS=$JAX_ENABLE_CHECKS"
	echo "JAX_SKIP_SLOW_TESTS=$JAX_SKIP_SLOW_TESTS"
	pytest -n auto --tb=short --maxfail=20 tests examples


	documentation:
	name: Documentation - test code snippets
	runs-on: ubuntu-latest
	timeout-minutes: 10
	strategy:
	matrix:
	python-version: ['3.10']
	steps:
	- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: ${{ matrix.python-version }}
	- name: Get pip cache dir
	id: pip-cache
	run: \|
	python -m pip install --upgrade pip wheel
	echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
	- name: pip cache
	uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
	with:
	path: ${{ steps.pip-cache.outputs.dir }}
	key: ${{ runner.os }}-pip-docs-${{ hashFiles('/setup.py', '/requirements.txt', '**/test-requirements.txt') }}
	- name: Install dependencies
	run: \|
	pip install -r docs/requirements.txt
	- name: Test documentation
	env:
	XLA_FLAGS: "--xla_force_host_platform_device_count=8"
	JAX_TRACEBACK_FILTERING: "off"
	JAX_ARRAY: 1
	PY_COLORS: 1
	run: \|
	pytest -n auto --tb=short --doctest-glob='.md' --doctest-glob='.rst' docs --doctest-continue-on-failure --ignore=docs/multi_process.md --ignore=docs/jax.experimental.array_api.rst
	pytest -n auto --tb=short --doctest-modules jax --ignore=jax/config.py --ignore=jax/experimental/jax2tf --ignore=jax/_src/lib/mlir --ignore=jax/_src/lib/triton.py --ignore=jax/_src/lib/mosaic_gpu.py --ignore=jax/interpreters/mlir.py --ignore=jax/experimental/array_serialization --ignore=jax/collect_profile.py --ignore=jax/_src/tpu_custom_call.py --ignore=jax/experimental/mosaic --ignore=jax/experimental/pallas --ignore=jax/_src/pallas --ignore=jax/experimental/array_api --ignore=jax/lib/xla_extension.py


	documentation_render:
	name: Documentation - render documentation
	runs-on: ubuntu-latest
	timeout-minutes: 10
	strategy:
	matrix:
	python-version: ['3.10']
	steps:
	- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: ${{ matrix.python-version }}
	- name: Get pip cache dir
	id: pip-cache
	run: \|
	python -m pip install --upgrade pip wheel
	echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
	- name: pip cache
	uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
	with:
	path: ${{ steps.pip-cache.outputs.dir }}
	key: ${{ runner.os }}-pip-docs-${{ hashFiles('/setup.py', '/requirements.txt', '**/test-requirements.txt') }}
	- name: Install dependencies
	run: \|
	pip install -r docs/requirements.txt
	- name: Render documentation
	run: \|
	sphinx-build --color -W --keep-going -b html -D nb_execution_mode=off docs docs/build/html


	jax2tf_test:
	name: "jax2tf_test (py ${{ matrix.python-version }} on ${{ matrix.os }}, x64=${{ matrix.enable-x64}})"
	runs-on: ${{ matrix.os }}
	timeout-minutes: 30
	strategy:
	matrix:
	# Test the oldest supported Python version here.
	include:
	- python-version: "3.10"
	os: ubuntu-latest
	enable-x64: 0
	num_generated_cases: 10
	steps:
	- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: ${{ matrix.python-version }}
	- name: Get pip cache dir
	id: pip-cache
	run: \|
	python -m pip install --upgrade pip wheel
	echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
	- name: pip cache
	uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
	with:
	path: ${{ steps.pip-cache.outputs.dir }}
	key: ${{ runner.os }}-py${{ matrix.python-version }}-pip-${{ hashFiles('/setup.py', '/requirements.txt', '**/test-requirements.txt') }}
	- name: Install dependencies
	run: \|
	pip install .[minimum-jaxlib] tensorflow -r build/test-requirements.txt

	- name: Run tests
	env:
	JAX_NUM_GENERATED_CASES: ${{ matrix.num_generated_cases }}
	JAX_ENABLE_X64: ${{ matrix.enable-x64 }}
	JAX_ENABLE_CHECKS: true
	JAX_SKIP_SLOW_TESTS: true
	PY_COLORS: 1
	run: \|
	pip install -e .
	echo "JAX_NUM_GENERATED_CASES=$JAX_NUM_GENERATED_CASES"
	echo "JAX_ENABLE_X64=$JAX_ENABLE_X64"
	echo "JAX_ENABLE_CHECKS=$JAX_ENABLE_CHECKS"
	echo "JAX_SKIP_SLOW_TESTS=$JAX_SKIP_SLOW_TESTS"
	pytest -n auto --tb=short --maxfail=20 jax/experimental/jax2tf/tests/jax2tf_test.py

	ffi:
	name: FFI example
	runs-on: linux-x86-g2-16-l4-1gpu
	container:
	image: index.docker.io/tensorflow/build:latest-python3.12@sha256:48e99608fe9434ada5b14e19fdfd8e64f4cfc83aacd328b9c2101b210e984295 # ratchet:index.docker.io/tensorflow/build:latest-python3.12
	timeout-minutes: 30
	steps:
	- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
	- name: Set up Python
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: 3.12
	- name: Get pip cache dir
	id: pip-cache
	run: \|
	python -m pip install --upgrade pip wheel
	echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
	- name: pip cache
	uses: actions/cache@6849a6489940f00c2f30c0fb92c6274307ccb58a # v4.1.2
	with:
	path: ${{ steps.pip-cache.outputs.dir }}
	key: ${{ runner.os }}-pip-ffi-examples-${{ hashFiles('/setup.py', '/requirements.txt', '/test-requirements.txt', 'examples//pyproject.toml') }}
	- name: Install JAX
	run: pip install .[cuda12]
	- name: Build and install example project
	run: python -m pip install -v ./examples/ffi[test]
	env:
	# We test building using GCC instead of clang. All other JAX builds use
	# clang, but it is useful to make sure that FFI users can compile using
	# a different toolchain. GCC is the default compiler on the
	# 'ubuntu-latest' runner, but we still set this explicitly just to be
	# clear.
	CMAKE_ARGS: -DCMAKE_CXX_COMPILER=g++ -DJAX_FFI_EXAMPLE_ENABLE_CUDA=ON
	- name: Run CPU tests
	run: python -m pytest examples/ffi/tests
	env:
	JAX_PLATFORM_NAME: cpu
	- name: Run GPU tests
	run: python -m pytest examples/ffi/tests

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Update jax.scipy.special.gamma and gammasgn to return NaN for negativ… #66362

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Update jax.scipy.special.gamma and gammasgn to return NaN for negativ… #66362

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Workflow file for this run