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Merge pull request #53 from kaylode/dev #76

Merge pull request #53 from kaylode/dev

Merge pull request #53 from kaylode/dev #76

Workflow file for this run

name: autobuild_tablr
on:
pull_request:
branches:
- master
- dev
push:
branches:
- master
- 'V**'
- dev
env:
GDRIVE_CREDENTIALS_DATA: ${{ secrets.GDRIVE_CREDENTIALS_DATA }}
REPO_TOKEN: ${{ secrets.GITHUB_TOKEN }}
jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: '3.10'
architecture: 'x64'
- uses: actions/setup-node@v3
with:
node-version: '16'
- uses: iterative/setup-cml@v1
- name: Display Python version
run: python -c "import sys; print(sys.version)"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install torch torchvision --extra-index-url https://download.pytorch.org/whl/cpu
pip install -e '.[dev,ml]'
pip install dvc dvc-gdrive
npm install -g markdown-table-cli
- name: Download data
run: |
echo "$GDRIVE_CREDENTIALS_DATA" > credentials.json
dvc remote modify gdrive --local gdrive_user_credentials_file ./credentials.json
dvc pull
ls -la samples
- name: Test with pytest
run: |
pytest tests/tabular --capture=no
- name: Display report
run: |
echo "# Tabular Classification Report" > report.md
echo "#### Metrics" >> report.md
cat runs/pytest_tablr/Validation/metrics.json | md-table >> report.md
echo "#### SHAP train" >> report.md
echo "![SHAP](runs/pytest_tablr/Importance/SHAP/train.png)" >> report.md
echo "#### SHAP val" >> report.md
echo "![SHAP](runs/pytest_tablr/Importance/SHAP/val.png)" >> report.md
echo "------------------" >> report.md
echo "#### Hyperparameters Tuning" >> report.md
echo "Leaderboard" >> report.md
cat runs/optuna/tablr/overview/leaderboard.json | md-table >> report.md
echo >> report.md
echo "Figures" >> report.md
echo "![History](runs/optuna/tablr/overview/history.png)" >> report.md
echo "![Contour plot](runs/optuna/tablr/overview/contour.png)" >> report.md
echo "![Parallel](runs/optuna/tablr/overview/parallel_coordinate.png)" >> report.md
echo "![Importance](runs/optuna/tablr/overview/param_importances.png)" >> report.md
echo "![Slice](runs/optuna/tablr/overview/slice.png)" >> report.md
cml comment create report.md