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Achievement: Starstruckx2Achievement: Arctic Code Vault ContributorAchievement: Pull Shark

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Achievement: Starstruckx2Achievement: Arctic Code Vault ContributorAchievement: Pull Shark

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@pythonkurs

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ksahlin/README.md

Hi there 👋

I am an assistant professor at Stockholm University (the Department of Mathematics) and SciLifeLab Fellow at the national center for molecular biosciences, Science for Life Laboratory.

I develop algorithms and models for analyzing large biological datasets.

Popular repositories Loading

  1. strobealign strobealign Public

    Aligns short reads using dynamic seed size with strobemers

    C++ 157 18

  2. strobemers strobemers Public

    A repository for generating strobemers and evalaution

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  3. ultra ultra Public

    Long-read splice alignment with high accuracy

    Python 60 10

  4. isONcorrect isONcorrect Public

    Error correction of ONT transcript reads

    Python 58 9

  5. BESST BESST Public

    BESST - scaffolder for genomic assemblies

    Python 57 13

  6. NGSpeciesID NGSpeciesID Public

    Reference-free clustering and consensus forming of long-read amplicon sequencing

    Python 52 16